Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dinoponera_20quadriceps_20[refseq_20GCF_5F001313825.1_202015-10-13] 14,123 sequences; 259,665,865 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq413 87.8 2e-12 seq5802 86.0 8e-12 seq590 86.0 8e-12 >seq413 Length=1084034 Score = 87.8 bits (96), Expect = 2e-12 Identities = 175/257 (68%), Gaps = 2/257 (1%) Strand=Plus/Plus Query 63591 CTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAAC 63650 |||||||| || || |||| | || || || || || || || |||||||| || Sbjct 769419 CTAGACATCTGTTGGTTCTTAGTACAGGCGTTGAACAACGTCGGCGAGGCGTGCGTGAAG 769478 Query 63651 CATTTTTCAGA-AAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAAT 63709 | ||| || ||||| ||||||||| || |||||| || ||||| || ||||| Sbjct 769479 TACCGTTCGGACAAGTA-ATTGTACGTTTCTATAGCTTTATCGATATCATCTTCGTGAAT 769537 Query 63710 TCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTT 63769 || || || || | ||| | ||| ||||||||||| || || |||||| ||| || || Sbjct 769538 GCCGACAGCTACTCTCATCAGCATATGCTGAGGTCTCTCCACTATCTTGCCGTTGATCTT 769597 Query 63770 CAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTC 63829 | || ||| | || | ||||| || || | || ||||| ||||| | || Sbjct 769598 GAGCAGATAGCTCCTCTCGAGCGTTTTGAAGCCGATGTAATTGTAGTTGAAGTCCCTATC 769657 Query 63830 GTAAATAATAACCGAGT 63846 ||| || ||| | |||| Sbjct 769658 GTATATTATAGCGGAGT 769674 Score = 84.2 bits (92), Expect = 3e-11 Identities = 109/149 (73%), Gaps = 4/149 (3%) Strand=Plus/Plus Query 62306 GGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGA--AATTCTCCAGACAATACTCTC 62363 ||| || ||| || ||||| ||||| || | ||| ||||| || |||||||| | Sbjct 767552 GGTCAAGTCTCGCAGCAGATGTGGATTGACGA--TGACGAATTCCCCGGACAATACGCGT 767609 Query 62364 CGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGCA 62423 | ||| ||||| ||||| ||||| || | ||||| || |||||||| || || || Sbjct 767610 CTCACGTAGATATTGCTGGTGTACGGCTCGATGGACTCGTTGTTTCCCAAGATCTGCGCC 767669 Query 62424 GTTGATGCAGTCGGCATAGGTGCCACCAA 62452 || || |||||||||||||| || | ||| Sbjct 767670 GTCGACGCAGTCGGCATAGGCGCAATCAA 767698 >seq5802 Length=86632 Score = 86.0 bits (94), Expect = 8e-12 Identities = 138/198 (70%), Gaps = 3/198 (2%) Strand=Plus/Plus Query 33594 ATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTC 33653 |||||| || || || ||||| || || || ||||| || ||||||||||| | ||||| Sbjct 11599 ATACATCTCGGAGTGGATGTTCTCTATAGCGATCTGGAAGCCGTAGAAACACCGCGCCTC 11658 Query 33654 GGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACT 33713 | || | || ||| || |||| || || ||||||||| || || ||||| Sbjct 11659 CGAGATTTTCACCTCTTGGCAGAATCTCTCAATCAGATTTTCATTAACGATGCCGTCGGA 11718 Query 33714 GGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTT--- 33770 ||| || || ||||| || || || ||| || ||| | ||||| | ||||||| Sbjct 11719 GGCGGCGAAGAACGCTAACACGTGGGATATGAAGTATCTCTCGTCGGAATTTAGTTTCTC 11778 Query 33771 ATTCCAATCATTGATATC 33788 || |||||| || |||| Sbjct 11779 ATCCCAATCCTTCTTATC 11796 >seq590 Length=2706923 Score = 86.0 bits (94), Expect = 8e-12 Identities = 105/141 (74%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 63955 CACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAA 64014 |||| || | ||| || |||||||| || || || |||| ||| ||||| | |||| | Sbjct 2570815 CACTGAAAACTTTCTTCGTTTCCTTATGCAGGTTGGATATGGCAATTCTTCCTGCTAAAG 2570756 Query 64015 TGGCATAATCCGGATGTTGTGTAGTACAAG-TGGCTGCTATTTCGGCTGCCAGAGTGTCC 64073 | |||||||| |||| || | | || | | ||||| || || || |||| ||||||| Sbjct 2570755 TCTCATAATCCTGATGCTGATT-GACCATGCTTGCTGCAATATCAGCCGCCAAAGTGTCC 2570697 Query 64074 AATTCTACCGTTGTTACTCCA 64094 ||||| |||||||| | |||| Sbjct 2570696 AATTCAACCGTTGTCATTCCA 2570676 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622837226458680