Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dinoponera_20quadriceps_20[refseq_20GCF_5F001313825.1_202015-10-13] 14,123 sequences; 259,665,865 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq413 98.7 9e-16 seq324 96.9 3e-15 >seq413 Length=1084034 Score = 98.7 bits (108), Expect = 9e-16 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 132197 AGATGTTGATTTACTATTTGATATTCACCCGATAAGACTCTTCGTACGTACAAATTACTA 132256 |||||| |||| || || |||| || || || || | || ||||| | ||| || Sbjct 767568 AGATGTGGATTGACGATGACGAATTCCCCGGACAATACGCGTCTCACGTAGATATTGCTG 767627 Query 132257 GTAAACGGCTCGAACGATTCGTTGTTTCCCAATATTTGAGCTGTCGTTGCCGTCGGCATG 132316 || ||||||||| || |||||||||||||| || || || |||| || |||||||| Sbjct 767628 GTGTACGGCTCGATGGACTCGTTGTTTCCCAAGATCTGCGCCGTCGACGCAGTCGGCATA 767687 Query 132317 TAGGCAATCAATAATGAATTGCGCAGCCCGTGTATGGCCATTTGCCGTTTAAGCTCGTCC 132376 |||||||| | ||||| | || |||||| | || |||| | || | || ||| Sbjct 767688 GGCGCAATCAAGAGGGAATTTCTCACCCCGTGCTTCGCGATTTTCGCCTTCAATTCATCC 767747 Query 132377 CAGTTCCACAGATC 132390 |||| ||||| ||| Sbjct 767748 CAGTCCCACAAATC 767761 >seq324 Length=2934362 Score = 96.9 bits (106), Expect = 3e-15 Identities = 150/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || ||| | || || ||| | || ||| ||||||| || || | Sbjct 1891510 ATGCAGATTTTCGTGAAGACACTGACGGGGAAAACCATCACCCTCGAAGTTGAAGCGTCC 1891569 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| |||||| | || || |||||| || |||||||| || || ||||| || Sbjct 1891570 GACACTATCGAGAACGTGAAGGCCAAGATTCAGGATAAAGAAGGGATCCCACCCGACCAG 1891629 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGA-TGACAGA-AACGTCAGCGATTATA 24168 ||| | || || | | |||||||||||||| || ||| | | ||| |||||||| Sbjct 1891630 CAGCGTCTCATCTTTGCTGGCAAGCAACTCGAGGACGGACGCACATTGTC--CGATTATA 1891687 Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGT 24199 |||| || || |||||||| |||| || || Sbjct 1891688 ACATCCAGAAGGAATCTACCCTTCACTTGGT 1891718 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || || || || || | || || | || ||||||||| | Sbjct 1892878 ATGCAGATCTTCGTCAAGACCTTGACGGGGAAGACTATCACGTTGGAGGTCGAGGCCTCC 1892937 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||||||| | || || |||||| |||||||||||||| || || || || Sbjct 1892938 GACACCATCGAGAACGTGAAGGCGAAGATTCAGGACAAAGAAGGCATTCCACCTGACCAG 1892997 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || || | || | || ||||| |||||||| || | | | | | |||||| ||| Sbjct 1892998 CAAAGGTTAATCTTCGCGGGCAAACAACTCGAGGACGGGCGCACCTTGTCCGATTACAAC 1893057 Query 24171 ATTCAAAAAGAATCTACAATTCA 24193 || || |||||||| || |||| Sbjct 1893058 ATCCAGAAAGAATCCACGCTTCA 1893080 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || || || ||||| |||| || | || || ||||| Sbjct 1891966 ATGCAAATTTTCGTCAAGACCTTGACAGGAAAGACGATCACTTTGGAGGTGGAGGCTTCG 1892025 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||||||| | || || ||||| |||||||||||||| || || || || Sbjct 1892026 GACACCATCGAGAACGTGAAGGCGAAGATCCAGGACAAAGAAGGCATTCCACCTGACCAG 1892085 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGA-TGACAGA-AACGTCAGCGATTATA 24168 || || |||| | || ||||| || ||||| || ||| | | ||| |||||| | Sbjct 1892086 CAAAGGTTGATCTTCGCAGGCAAACAGCTCGAGGACGGACGCACATTGTC--CGATTACA 1892143 Query 24169 ACATTCAAAAAGAATCTACAATTCA 24193 |||| || ||||||||||| |||| Sbjct 1892144 ACATCCAGAAAGAATCTACCCTTCA 1892168 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || || || || || | || || | || ||||||||| | Sbjct 1892194 ATGCAGATTTTTGTGAAGACTTTGACCGGCAAGACCATCACATTGGAGGTCGAGGCCTCC 1892253 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||||||| | |||||| ||||| ||||| || || || || || ||||| Sbjct 1892254 GACACCATCGAGAATGTCAAAGCGAAGATCCAGGACAAGGAGGGGATCCCCCCGGATCAG 1892313 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 |||||| |||| | | || || || |||||||| | | | | | | || || ||| Sbjct 1892314 CAGAGATTGATCTTTGCTGGGAAACAGCTCGAAGACGGCCGCACCCTGTCTGACTACAAC 1892373 Query 24171 ATTCAAAAAGAATCTAC 24187 || || || ||||| || Sbjct 1892374 ATCCAGAAGGAATCCAC 1892390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429861997669065