Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dinoponera_20quadriceps_20[refseq_20GCF_5F001313825.1_202015-10-13] 14,123 sequences; 259,665,865 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq324 123 2e-23 seq3542 114 1e-20 seq408 102 8e-17 seq413 93.3 4e-14 seq5802 86.0 6e-12 >seq324 Length=2934362 Score = 123 bits (136), Expect = 2e-23 Identities = 167/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || ||||| || || | ||| | |||||||||||||| |||||||| || Sbjct 1891965 GCCACCACGTAAACGGAGAACCAGATGCAGAGTCGACTCCTTTTGGATGTTGTAGTCCGA 1891906 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || |||||| || || ||||| || || || |||| || | |||||| || ||||| Sbjct 1891905 CAGGGTGCGGCCATCTTCGAGCTGTTTCCCAGCAAAGATCAATCTCTGCTGATCTGGAGG 1891846 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGC-TTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185 ||| || || ||||| ||| || ||| |||| | ||| | ||||||| || ||||| Sbjct 1891845 GATCCCCTCCTTGTCTTGGATCTT-TGCTTTGACATTCTCGATGGTATCGGAGGCCTCGA 1891787 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | || | ||| || ||||| | ||| || || || ||||||||| Sbjct 1891786 CCTCCAATGTGATGGTCTTGCCGGTCAAAGTCTTCACAAAGATCTGCATG 1891737 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || || | || || || || || | ||| || ||||| || ||||| |||||| Sbjct 1891737 GCCGCCTCGAAGCCGAAGTACCAAGTGAAGGGTAGATTCCTTCTGGATGTTATAATCGGA 1891678 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || ||||| |||||| || |||||||| || |||| | |||||||||||| || || Sbjct 1891677 CAATGTGCGTCCGTCCTCGAGTTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCGGGTGG 1891618 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| |||||||| || || || ||| | | ||| | ||| |||| | || | Sbjct 1891617 GATCCCTTCTTTATCCTGAATCTTGGCCTTCACGTTCTCGATAGTGTCGGACGCTTCAAC 1891558 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| ||| | |||||| || || || || || ||||||||||||||| Sbjct 1891557 TTCGAGGGTGATGGTTTTCCCCGTCAGTGTCTTCACGAAAATCTGCATG 1891509 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 || || || || || |||||||||||| || ||||||| |||||| || || ||||| Sbjct 1893074 GTGGATTCTTTCTGGATGTTGTAATCGGACAAGGTGCGCCCGTCCTCGAGTTGTTTGCCC 1893015 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 ||| ||||||| | |||||||| || || || ||||||||||| || ||| ||| Sbjct 1893014 GCGAAGATTAACCTTTGCTGGTCAGGTGGAATGCCTTCTTTGTCCTGAATCTTCGCCTTC 1892955 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217 | | ||| | || |||| || ||||| || | || | || || || || | || Sbjct 1892954 ACGTTCTCGATGGTGTCGGAGGCCTCGACCTCCAACGTGATAGTCTTCCCCGTCAAGGTC 1892895 Query 131218 TTTACGAAAATCTGCAT 131234 || ||||| |||||||| Sbjct 1892894 TTGACGAAGATCTGCAT 1892878 Score = 100 bits (110), Expect = 3e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079 || || || | ||| | || || ||||| || |||||||| || || |||||| | Sbjct 1892408 CGGAGTACCAGATGCAGAGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCG 1892349 Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139 || || ||||| || || || |||| || | |||||| ||||| ||||| || || ||| Sbjct 1892348 TCTTCGAGCTGTTTCCCAGCAAAGATCAATCTCTGCTGATCCGGGGGGATCCCCTCCTTG 1892289 Query 131140 TCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACG 131199 || ||| ||| |||| | ||| | || |||| || ||||| || | || | | Sbjct 1892288 TCCTGGATCTTCGCTTTGACATTCTCGATGGTGTCGGAGGCCTCGACCTCCAATGTGATG 1892229 Query 131200 GTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || || ||||| | ||| || || ||||||||||| Sbjct 1892228 GTCTTGCCGGTCAAAGTCTTCACAAAAATCTGCAT 1892194 Score = 95.1 bits (104), Expect = 1e-14 Identities = 152/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079 || ||||| | || | ||| |||||||| || |||||||| ||| | ||| ||| | Sbjct 1892864 CGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGATAAGGTACGCCCG 1892805 Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139 ||||| ||||| || || ||| |||| | | || ||||| || ||||| || |||||| Sbjct 1892804 TCCTCAAGCTGTTTCCCCGCGAAGATCAGTCTTTGTTGGTCGGGTGGGATGCCCTCTTTG 1892745 Query 131140 TCGGTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAAC 131198 || ||| ||| |||| | | ||| | ||||| | | |||| || | |||| Sbjct 1892744 TCT-TGAATTTTGGCTTTCACGTTCTCGATGGTATCCGACGCTTCGACCTCCAAAGTAAT 1892686 Query 131199 GGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||||||| || | || || || ||||||||||| Sbjct 1892685 AGTTTTACCAGTCAAGGTCTTGACAAAAATCTGCAT 1892650 Score = 93.3 bits (102), Expect = 4e-14 Identities = 140/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 131037 GGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCC 131096 ||| || || || || |||||||||||| || ||||| |||||| ||||| ||||| Sbjct 1892163 GGTAGATTCTTTCTGGATGTTGTAATCGGACAATGTGCGTCCGTCCTCGAGCTGTTTGCC 1892104 Query 131097 TGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTT 131156 |||| |||| || | |||||||| || || || ||||||||||| ||| ||| ||| Sbjct 1892103 TGCGAAGATCAACCTTTGCTGGTCAGGTGGAATGCCTTCTTTGTCCTGGATCTTCGCCTT 1892044 Query 131157 GAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGT 131216 | | ||| | || || | | ||| | || | || | || || || || | || Sbjct 1892043 CACGTTCTCGATGGTGTCCGAAGCCTCCACCTCCAAAGTGATCGTCTTTCCTGTCAAGGT 1891984 Query 131217 TTTTACGAAAATCTGCATG 131235 || |||||||| |||||| Sbjct 1891983 CTTGACGAAAATTTGCATG 1891965 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079 |||| |||||||| | || ||||| || ||||||||||| ||| || |||||| | Sbjct 1892636 CGCAAAACTAAATGCAAAGTAGACTCTTTCTGAATGTTGTAGTCGGACAGGGTGCGTCCG 1892577 Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139 || || ||||| || || ||| |||| | | |||||||| || || || ||||| || Sbjct 1892576 TCTTCCAGCTGTTTCCCCGCGAAGATCAGTCTTTGCTGGTCGGGTGGAATGCCTTCCTTA 1892517 Query 131140 TCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACG 131199 || ||| || ||| | | || | ||| || | | ||| | || | || | | Sbjct 1892516 TCTTGGATCTTGGCCTTCACATTTTCAATAGTGTCAGAAGCCTCAACCTCCAAAGTGATG 1892457 Query 131200 GTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 ||||| || || | ||| || || ||||||||||| Sbjct 1892456 GTTTTGCCCGTCAAAGTCTTCACAAAAATCTGCAT 1892422 >seq3542 Length=209091 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || || | |||| |||||||| | || |||||||| |||||||||||||| Sbjct 186780 GCCTCCACGAAGTCGCAAGACTAAATGCAGTGTTGACTCCTTCTGAATGTTGTAATCTGA 186839 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||| | || |||||||||||||| ||| | || | ||||||||| |||||||| Sbjct 186840 AAGGGTTCTACCATCTTCTAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGATCCGGAGG 186899 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||||| ||||| || |||||| || | | || | || |||| | |||| Sbjct 186900 AATTCCCTCTTTATCCTGGATTTTGGCTTTCACATTTTCTATTGTGTCGGAAGCTTCGAC 186959 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | ||||||||| || || || || || || || ||||| Sbjct 186960 TTCGAGGGTGATGGTTTTACCCGTGAGGGTCTTCACAAATATTTGCAT 187007 >seq408 Length=1748099 Score = 102 bits (112), Expect = 8e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||||||||| || || ||| || || || |||||| | ||||||||| || ||| Sbjct 1304020 CCTTTTGAATATTATAGTCGGACAAAGTACGTCCGTCCTCCAACTGCTTGCCAGCAAAGA 1304079 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 ||| |||||||| || || || |||||||| ||||| ||| || ||| | | | Sbjct 1304080 TTAGTCGCTGCTGATCAGGCGGAATTCCTTCCTTGTCCTGGATCTTAGCCTTTACATTTT 1304139 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || |||| | ||| | || | ||| | |||||||| || || ||||| |||| Sbjct 1304140 CGATTGTGTCGGATGCCTCCACCTCAAGGGTGATCGTTTTACCCGTGAGGGTTTTCACGA 1304199 Query 131225 AAATCTGCATG 131235 ||||||||||| Sbjct 1304200 AAATCTGCATG 1304210 >seq413 Length=1084034 Score = 93.3 bits (102), Expect = 4e-14 Identities = 122/169 (72%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 145619 TTGACGGCGATCGACGCCAAATTACAAACTGCCGTCTCCTCGGCGTCGCTGTATTGTACG 145678 || |||||||| || || ||||| || || || ||||| | | | ||| | | Sbjct 768312 TTAACGGCGATAGATGCTAAATTGCACACGGCGACTTCCTCCGGGCTGGAGTACTCGATA 768371 Query 145679 ATCTCGGCGCACAAATTGCTACATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTG 145738 | ||||| |||||||||||| |||||||| || ||||| | ||| ||||| ||| | Sbjct 768372 ACCTCGGTGCACAAATTGCTGCATTTGATCGTGCCCAGGTGTTGATGATTCGATTTGCGA 768431 Query 145739 TTGCACGCGTCCTTGTAGAGCATGTACGGTCCGCCAGTCTCCACCTGCG 145787 ||||| || ||||||||||| ||||| || ||||||||||||| Sbjct 768432 TTGCAGTGATCTTTGTAGAGCATATACGGCGTCCCGGTCTCCACCTGCG 768480 >seq5802 Length=86632 Score = 86.0 bits (94), Expect = 6e-12 Identities = 157/225 (70%), Gaps = 4/225 (2%) Strand=Plus/Minus Query 46063 CTGCTTAATGCGTTTGAACGTATGCCGTGCGTGCGC-AAGAAAACCGACTGGGCGATGAA 46121 ||| | ||||| | ||| | |||| ||||| ||| |||||| || | |||||| |||| Sbjct 10896 CTGTTCAATGCAATCGAAACTTTGCCCTGCGT-CGCGAAGAAAGCCAATTGGGCGTTGAA 10838 Query 46122 GTGGATCAACAGCAGCACCGCGACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGA 46181 |||||||| | | || || ||| | || ||| | | || || || || || Sbjct 10837 TTGGATCAATCACGATAGTGCAACGTTCCCGGAACGTGTAATCGCGTTCGCTGCGGTCGA 10778 Query 46182 GGGCGTCtttttttCTGGCAGTTTTGCCGCCATCTTTTACATCAA-AACCAAGGGCATCA 46240 ||| | ||||| |||||||| |||||||| || | | || || | ||| | | Sbjct 10777 GGGAATATTTTTCAGCGGCAGTTTCGCCGCCATTTTCTGGCTGAAGAAGCGAGGAG-TGA 10719 Query 46241 TGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGCGCGACGAGG 46285 |||| || || ||||| ||||||||||| || ||||| ||||||| Sbjct 10718 TGCCGGGTCTCACGTTCAGCAACGAGCTTATTTCGCGAGACGAGG 10674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471929472040320