Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dinoponera_20quadriceps_20[refseq_20GCF_5F001313825.1_202015-10-13] 14,123 sequences; 259,665,865 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq3542 107 2e-18 seq324 95.1 1e-14 >seq3542 Length=209091 Score = 107 bits (118), Expect = 2e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 |||||||| || | ||| |||| ||| |||||||| ||||| || ||||||||||||| Sbjct 187465 CCTCCTCGAAGACGCAGAACCAGATGAAGCGTGGATTCCTTCTGGATGTTGTAGTCGGAA 187524 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| || | || ||||| |||||||| || |||| || ||||| || ||| ||| Sbjct 187525 AGAGTTCTGCCATCTTCCAACTGTTTGCCGGCGAAAATCAGACGCTGCTGATCCGGAGGA 187584 Query 16829 ACGCCCTCTTTGTC 16842 | ||||||||||| Sbjct 187585 ATTCCCTCTTTGTC 187598 Score = 105 bits (116), Expect = 5e-18 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 |||||||| || | ||| |||| ||| || ||||| ||||| || ||||||||||||| Sbjct 187009 CCTCCTCGAAGGCGCAGAACCAAATGAAGTGTGGATTCCTTCTGGATGTTGTAGTCGGAA 187068 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| || | || ||||| |||||||| || |||| || ||||| || ||| ||| Sbjct 187069 AGAGTTCTGCCATCTTCCAACTGTTTGCCAGCGAAAATCAGACGCTGCTGATCCGGAGGA 187128 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||||||||| || || || ||| || | | | ||||| | || Sbjct 187129 ATTCCCTCTTTGTCTTGGATCTTGGC--CTTTACATTTTCTATTGTGTCAGAAGCTTCGA 187186 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||| | ||||||||| || || || || || || ||||| || ||||| Sbjct 187187 CTTCGAGGGTGATGGTCTTGCCTGTGAGAGTCTTTACAAATATTTGCAT 187235 Score = 105 bits (116), Expect = 5e-18 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 |||||||| || | ||| |||| ||| || ||||| ||||| || ||||||||||||| Sbjct 187237 CCTCCTCGAAGACGCAGAACCAAATGAAGTGTGGATTCCTTCTGGATGTTGTAGTCGGAA 187296 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| || | || ||||| |||||||| || |||| || ||||| || ||| ||| Sbjct 187297 AGAGTTCTGCCATCTTCCAACTGTTTGCCGGCGAAAATCAGACGCTGCTGATCCGGAGGA 187356 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||||||||| || || ||| || || | | | ||||| | || Sbjct 187357 ATTCCCTCTTTGTCTTGGATCTTGGCT--TTTACATTTTCTATCGTGTCAGAAGCTTCGA 187414 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||| | || || || || || || || ||||||||||| |||||||| Sbjct 187415 CTTCGAGAGTAATAGTCTTGCCTGTGAGAGTTTTGACAAATATCTGCAT 187463 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || || | |||||| || |||||||| || |||||||| || | Sbjct 186781 CCTCCACGAAGTCGCAAGACTAAATGCAGTGTTGACTCCTTCTGAATGTTGTAATCTGAA 186840 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | |||| | | || || | || ||||| || |||| || ||||| || ||| ||| Sbjct 186841 AGGGTTCTACCATCTTCTAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGATCCGGAGGA 186900 Query 16829 ACGCCCTCTTTGTCGGCAATTT--GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | |||||||| || |||| ||| ||||| | | | |||||| | || Sbjct 186901 ATTCCCTCTTTATCCTGGATTTTGGCT--TTCACATTTTCTATTGTGTCGGAAGCTTCGA 186958 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||| | |||||||||||| || || || || || ||||| || ||||| Sbjct 186959 CTTCGAGGGTGATGGTTTTACCCGTGAGGGTCTTCACAAATATTTGCAT 187007 >seq324 Length=2934362 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || ||||| |||| ||||||| || || || || ||||| || ||||| || |||| | Sbjct 1891736 CCGCCTCGAAGCCGAAGTACCAAGTGAAGGGTAGATTCCTTCTGGATGTTATAATCGGAC 1891677 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || ||||||| | ||| ||||| ||| | || || ||||| ||||| || Sbjct 1891676 AATGTGCGTCCGTCCTCGAGTTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCGGGTGGG 1891617 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | || ||||| || ||| | |||||| | | | ||||||| | || | Sbjct 1891616 ATCCCTTCTTTATCCTGAATCTTGGCCTTCACGTTCTCGATAGTGTCGGACGCTTCAACT 1891557 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | |||||||||||| || ||||| || || || ||||||||||| Sbjct 1891556 TCGAGGGTGATGGTTTTCCCCGTCAGTGTCTTCACGAAAATCTGCAT 1891510 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 ||||||| |||||| ||||| ||||| || ||||||||||| | || ||| | |||| Sbjct 1892405 AGTACCAGATGCAGAGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCGTCT 1892346 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 || | ||||| || ||| | || | | ||| || ||| || | ||||| ||||| Sbjct 1892345 TCGAGCTGTTTCCCAGCAAAGATCAATCTCTGCTGATCCGGGGGGATCCCCTCCTTGTCC 1892286 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || ||| || || | | | |||||| || ||| |||| ||||||| Sbjct 1892285 TGGATCTTCGCT--TTGACATTCTCGATGGTGTCGGAGGCCTCGACCTCCAATGTGATGG 1892228 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | || ||||||| || || |||||||||||||| Sbjct 1892227 TCTTGCCGGTCAAAGTCTTCACAAAAATCTGCAT 1892194 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || ||||| || | || |||| || || ||||||||||| || ||||||||||||| Sbjct 1892876 CCGCCTCGAAGTCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAT 1892817 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| ||||||| | ||||| ||||| | || || | |||||||| || Sbjct 1892816 AAGGTACGCCCGTCCTCAAGCTGTTTCCCCGCGAAGATCAGTCTTTGTTGGTCGGGTGGG 1892757 Query 16829 ACGCCCTCTTTGTCGGCAATTT--GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | |||||||||||| ||||| ||| ||||| | | | || || | ||| || Sbjct 1892756 ATGCCCTCTTTGTCTTGAATTTTGGCT--TTCACGTTCTCGATGGTATC-CGACGCTTCG 1892700 Query 16887 -TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| || || ||||| || |||| || ||||||||||||||||| Sbjct 1892699 ACCTCCAAAGTAATAGTTTTACCAGTCAAGGTCTTGACAAAAATCTGCAT 1892650 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 ||||| | || |||||||| || || || |||||||| |||| || ||| ||||| Sbjct 1893089 AGTACAAGGTGAAGCGTGGATTCTTTCTGGATGTTGTAATCGGACAAGGTGCGCCCGTCC 1893030 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 || | |||||||||||| | || | || || ||||| || | ||| |||||||| Sbjct 1893029 TCGAGTTGTTTGCCCGCGAAGATTAACCTTTGCTGGTCAGGTGGAATGCCTTCTTTGTCC 1892970 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 ||| | | |||||| | | | |||||| || ||| |||| ||||| || Sbjct 1892969 TGAATCTTCGCCTTCACGTTCTCGATGGTGTCGGAGGCCTCGACCTCCAACGTGATAGTC 1892910 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || |||| || ||||| || |||||||| Sbjct 1892909 TTCCCCGTCAAGGTCTTGACGAAGATCTGCAT 1892878 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/214 (69%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| |||||| || ||||||||||| ||||||||||| | || ||| | | || Sbjct 1891949 AGAACCAGATGCAGAGTCGACTCCTTTTGGATGTTGTAGTCCGACAGGGTGCGGCCATCT 1891890 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 || | ||||| || ||| | || | | ||| || || ||| | ||||| ||||| Sbjct 1891889 TCGAGCTGTTTCCCAGCAAAGATCAATCTCTGCTGATCTGGAGGGATCCCCTCCTTGTCT 1891830 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || |||||| || || | | | || ||| || ||| |||| ||||||| Sbjct 1891829 TGGATCTTTGCT--TTGACATTCTCGATGGTATCGGAGGCCTCGACCTCCAATGTGATGG 1891772 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | || ||||||| || || ||||| |||||||| Sbjct 1891771 TCTTGCCGGTCAAAGTCTTCACAAAGATCTGCAT 1891738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405018274607770