Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dinoponera_20quadriceps_20[refseq_20GCF_5F001313825.1_202015-10-13] 14,123 sequences; 259,665,865 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq324 132 4e-26 seq3542 131 1e-25 seq408 93.3 4e-14 >seq324 Length=2934362 Score = 132 bits (146), Expect = 4e-26 Identities = 170/232 (73%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| ||||| || || | ||||| | || || ||| | || Sbjct 1892878 ATGCAGATCTTCGTCAAGACCTTGACGGGGAAGACTATCACGTTGGAGGTCGAGGCCTCC 1892937 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| |||||| ||||| | || | ||| ||||||||||| |||||||||||||| Sbjct 1892938 GACACCATCGAGAACGTGAAGGCGAAGATTCAG-GACAAAGAAGGCATTCCACCTGACCA 1892996 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 || || | || || || ||||||||| | || || | ||||| || ||||||||| Sbjct 1892997 GCAAAGGTTAATCTTCGCGGGCAAACAACTCGAGGACGGGCGCACCTTGTCCGATTACAA 1893056 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAAT 25229 || || |||||||||||||| || | || || | || ||||| || ||| Sbjct 1893057 CATCCAGAAAGAATCCACGCTTCACCTTGTACTTCGCCTTAGAGGTGGCAAT 1893108 Score = 131 bits (144), Expect = 1e-25 Identities = 169/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055 || ||||| || || || ||||| |||| || ||| ||||||| ||||||| || || Sbjct 1891507 ACCATGCAGATTTTCGTGAAGACACTGACGGGGAAAACCATCACCCTCGAAGTTGAAGCG 1891566 Query 25056 TCTGACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 || |||||||||||| |||| || || | ||| || ||||||||||| ||||| || Sbjct 1891567 TCCGACACTATCGAGAACGTGAAGGCCAAGATTCA-GGATAAAGAAGGGATCCCACCCGA 1891625 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||| ||||| | || ||||| ||||| ||| | || || | ||||| || |||||| Sbjct 1891626 CCAGCAGCGTCTCATCTTTGCTGGCAAGCAACTCGAGGACGGACGCACATTGTCCGATTA 1891685 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || || || || ||||| || || || || || || |||| |||| || Sbjct 1891686 TAACATCCAGAAGGAATCTACCCTTCACTTGGTACTTCGGCTTCGAGGCGG 1891736 Score = 123 bits (136), Expect = 2e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||| ||||| || || | ||||| | || |||||| | || Sbjct 1891966 ATGCAAATTTTCGTCAAGACCTTGACAGGAAAGACGATCACTTTGGAGGTGGAGGCTTCG 1892025 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| |||||| ||||| || ||| ||||||||||| |||||||||||||| Sbjct 1892026 GACACCATCGAGAACGTGAAGGCGAAGATCCAGGACAAAGAAGGCATTCCACCTGACCAG 1892085 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || || | || || || |||||||| | || || | ||||| || ||||||||| Sbjct 1892086 CAAAGGTTGATCTTCGCAGGCAAACAGCTCGAGGACGGACGCACATTGTCCGATTACAAC 1892145 Query 25179 ATTCAAAAAGAATCCACGCTACA 25201 || || |||||||| || || || Sbjct 1892146 ATCCAGAAAGAATCTACCCTTCA 1892168 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||||||||| || ||| ||||||| | || || ||| | ||| Sbjct 1892422 ATGCAGATTTTTGTGAAGACTTTGACGGGCAAAACCATCACTTTGGAGGTTGAGGCTTCT 1892481 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 |||||||| || ||||| || ||| || || ||||| |||||||| ||||| Sbjct 1892482 GACACTATTGAAAATGTGAAGGCCAAGATCCAAGATAAGGAAGGCATTCCACCCGACCAG 1892541 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || | | || || || || ||||| | ||||| | ||||| || ||| ||||| Sbjct 1892542 CAAAGACTGATCTTCGCGGGGAAACAGCTGGAAGACGGACGCACCCTGTCCGACTACAAC 1892601 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGT 25207 ||||| ||||| || || | |||||||| Sbjct 1892602 ATTCAGAAAGAGTCTACTTTGCATTTAGT 1892630 Score = 105 bits (116), Expect = 6e-18 Identities = 154/215 (72%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| |||||||||||||| || |||||||| | || || ||| | || Sbjct 1891738 ATGCAGATCTTTGTGAAGACTTTGACCGGCAAGACCATCACATTGGAGGTCGAGGCCTCC 1891797 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || || |||||| | || |||| ||| ||| ||||| || ||||| || || || Sbjct 1891798 GATACCATCGAG--AATGTCAAAGC-AAAGATCCAAGACAAGGAGGGGATCCCTCCAGAT 1891854 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||| | | || ||||| || ||||| | ||||||| ||||| || || ||| Sbjct 1891855 CAGCAGAGATTGATCTTTGCTGGGAAACAGCTCGAAGATGGCCGCACCCTGTCGGACTAC 1891914 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || ||||| || || || || ||| | || || Sbjct 1891915 AACATCCAAAAGGAGTCGACTCTGCATCTGGTTCT 1891949 Score = 105 bits (116), Expect = 6e-18 Identities = 154/215 (72%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| |||||||||||||| || |||||||| | || || ||| | || Sbjct 1892194 ATGCAGATTTTTGTGAAGACTTTGACCGGCAAGACCATCACATTGGAGGTCGAGGCCTCC 1892253 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| |||||| | || |||| || ||| ||||| || ||||| || || || Sbjct 1892254 GACACCATCGAG--AATGTCAAAGC-GAAGATCCAGGACAAGGAGGGGATCCCCCCGGAT 1892310 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||| | | || ||||| || ||||| | ||||| | ||||| || || ||| Sbjct 1892311 CAGCAGAGATTGATCTTTGCTGGGAAACAGCTCGAAGACGGCCGCACCCTGTCTGACTAC 1892370 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || |||||||| || ||| | || || Sbjct 1892371 AACATCCAGAAGGAATCCACTCTGCATCTGGTACT 1892405 >seq3542 Length=209091 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||||||||||||||||||| | || || || ||||||| ||||||| || | ||| Sbjct 187235 ATGCAAATATTTGTAAAGACTCTCACAGGCAAGACCATCACCCTCGAAGTCGAAGCTTCT 187176 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || | ||| || ||| |||||||| || ||||| || || || Sbjct 187175 GACACAATAGAAAATGTAAAGGCCAAGATCCAAGACAAAGAGGGAATTCCTCCGGATCAG 187116 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | ||||| || |||||||| || ||||||| | ||| | ||| ||||| Sbjct 187115 CAGCGTCTGATTTTCGCTGGCAAACAGTTGGAAGATGGCAGAACTCTTTCCGACTACAAC 187056 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || || || |||||||| || ||||| || || | || ||||||| Sbjct 187055 ATCCAGAAGGAATCCACACTTCATTTGGTTCTGCGCCTTCGAGGAGG 187009 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||||||||| ||||| | || |||||| ||||||| ||||||| || | || Sbjct 187007 ATGCAAATATTTGTGAAGACCCTCACGGGTAAAACCATCACCCTCGAAGTCGAAGCTTCC 186948 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || |||| |||||| || ||||| || ||||| || || || Sbjct 186947 GACACAATAGAAAATGTGAAAGCCAAAATCCAGGATAAAGAGGGAATTCCTCCGGATCAG 186888 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | ||||| |||||||| || ||||||||| | | || | |||||||| Sbjct 186887 CAGCGTCTGATTTTCGCCGGCAAGCAGCTAGAAGATGGTAGAACCCTTTCAGATTACAAC 186828 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGT 25207 ||||| || || || || || |||||||| Sbjct 186827 ATTCAGAAGGAGTCAACACTGCATTTAGT 186799 Score = 114 bits (126), Expect = 1e-20 Identities = 167/233 (72%), Gaps = 6/233 (3%) Strand=Plus/Minus Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055 || |||||||| ||||| |||||| | || || || ||||||| |||| || || | Sbjct 187694 ACCATGCAAATCTTTGTGAAGACTCTTACAGGCAAGACCATCACTCTCGAGGTCGAAGCT 187635 Query 25056 TCTGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCT 25112 ||||| || || || | || |||| || | || |||||||| || ||||| || Sbjct 187634 TCTGATACAATAGAA--AATGTAAAAGCCAAGATCCAA-GACAAAGAGGGAATTCCTCCG 187578 Query 25113 GACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGAT 25172 || || ||||| | ||||| ||||||||||| || ||||||| | ||| | ||| Sbjct 187577 GATCAGCAGCGTCTGATTTTCGCCGGCAAACAGTTGGAAGATGGCAGAACTCTTTCCGAC 187518 Query 25173 TACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||| || || || ||||||||||| ||| | || || | || ||||||| Sbjct 187517 TACAACATCCAGAAGGAATCCACGCTTCATCTGGTTCTGCGTCTTCGAGGAGG 187465 Score = 109 bits (120), Expect = 5e-19 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| |||||||| || ||| | || || || | || || ||||||| || | ||| Sbjct 187463 ATGCAGATATTTGTCAAAACTCTCACAGGCAAGACTATTACTCTCGAAGTCGAAGCTTCT 187404 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| || || | || |||| || | || |||||||| || ||||| || || Sbjct 187403 GACACGATAGAA--AATGTAAAAGCCAAGATCCAA-GACAAAGAGGGAATTCCTCCGGAT 187347 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||||| | ||||| ||||||||||| || ||||||| | ||| | ||| ||| Sbjct 187346 CAGCAGCGTCTGATTTTCGCCGGCAAACAGTTGGAAGATGGCAGAACTCTTTCCGACTAC 187287 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || || || || |||||||| || ||||| || || | || ||||||| Sbjct 187286 AACATCCAGAAGGAATCCACACTTCATTTGGTTCTGCGTCTTCGAGGAGG 187237 >seq408 Length=1748099 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055 || ||||| || || || || || | || |||||| | ||||| | || |||||| | Sbjct 1304212 ACCATGCAGATTTTCGTGAAAACCCTCACGGGTAAAACGATCACCCTTGAGGTGGAGGCA 1304153 Query 25056 TCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || ||||| ||||| | ||| || ||| ||||| ||||| ||||| ||||| Sbjct 1304152 TCCGACACAATCGAAAATGTAAAGGCTAAGATCCAGGACAAGGAAGGAATTCCGCCTGAT 1304093 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||||| | || ||||| ||||| || || || || | || ||| || ||| || Sbjct 1304092 CAGCAGCGACTAATCTTTGCTGGCAAGCAGTTGGAGGACGGACGTACTTTGTCCGACTAT 1304033 Query 25176 AATATTCAAAA 25186 ||||||||||| Sbjct 1304032 AATATTCAAAA 1304022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433253413824245