Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dinoponera_20quadriceps_20[refseq_20GCF_5F001313825.1_202015-10-13] 14,123 sequences; 259,665,865 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq2971 116 4e-21 seq5802 111 2e-19 seq1366 107 2e-18 >seq2971 Length=443972 Score = 116 bits (128), Expect = 4e-21 Identities = 77/83 (93%), Gaps = 2/83 (2%) Strand=Plus/Plus Query 126269 AGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC-TC-GGGAGCGTGG 126326 |||||||||||| |||||||||||||||| ||||| |||||||||| || |||||||||| Sbjct 228038 AGGTTGGCCGAGCGGTCTAAGGCGCCAGACTTAAGTTCTGGTTCCCATCTGGGAGCGTGG 228097 Query 126327 GTTCGAACCCCACACCTGACAAA 126349 |||||||||||||||||| |||| Sbjct 228098 GTTCGAACCCCACACCTGGCAAA 228120 >seq5802 Length=86632 Score = 111 bits (122), Expect = 2e-19 Identities = 121/161 (75%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421 ||||| || ||||| | || |||||||| || || |||| ||||| || || || ||| Sbjct 11576 ATGTAGGTCTCGATAAGCAAGGAATACATCTCGGAGTGGATGTTCTCTATAGCGATCTGG 11635 Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGA 93481 || ||||||||||| | || |||| ||| | ||| ||||| | |||||||| | ||| Sbjct 11636 AAGCCGTAGAAACACCGCGCCTCCGAGATTTTCACCTCTTGGCAGAATCTCTCAATCAGA 11695 Query 93482 TTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAA 93522 |||||||| || || || ||||| || || || || || || Sbjct 11696 TTTTCATTAACGATGCCGTCGGAGGCGGCGAAGAACGCTAA 11736 >seq1366 Length=3285867 Score = 107 bits (118), Expect = 2e-18 Identities = 80/91 (88%), Gaps = 2/91 (2%) Strand=Plus/Plus Query 126269 AGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC-TC-GGGAGCGTGG 126326 |||||||||||| |||||||||||||||| ||||| |||||||||| || |||||||||| Sbjct 480814 AGGTTGGCCGAGCGGTCTAAGGCGCCAGACTTAAGTTCTGGTTCCCATCTGGGAGCGTGG 480873 Query 126327 GTTCGAACCCCACACCTGACAAATTATTATT 126357 ||||||||||||||| | |||| | || || Sbjct 480874 GTTCGAACCCCACACTTAGCAAAATTTTTTT 480904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556762493186520