Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dinoponera_20quadriceps_20[refseq_20GCF_5F001313825.1_202015-10-13] 14,123 sequences; 259,665,865 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq3542 140 3e-28 seq324 127 2e-24 >seq3542 Length=209091 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || || | || |||||||| |||| || ||||| ||| | || Sbjct 187007 ATGCAAATATTTGTGAAGACCCTCACGGGTAAAACCATCACCCTCGAAGTCGAAGCTTCC 186948 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | ||| ||||| || || || ||||| ||||| || ||||| Sbjct 186947 GACACAATAGAAAATGTGAAAGCCAAAATCCAGGATAAAGAGGGAATTCCTCCGGATCAG 186888 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || |||||||| ||| |||| ||| | ||| | || ||||||||| Sbjct 186887 CAGCGTCTGATTTTCGCCGGCAAGCAGCTAGAAGATGGTAGAACCCTTTCAGATTACAAC 186828 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 ||||| || || || || | |||||||| |||||| | || ||||| Sbjct 186827 ATTCAGAAGGAGTCAACACTGCATTTAGTCTTGCGACTTCGTGGAGG 186781 Score = 136 bits (150), Expect = 3e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| |||||| | || || || || | ||||| ||||| ||| | | Sbjct 187463 ATGCAGATATTTGTCAAAACTCTCACAGGCAAGACTATTACTCTCGAAGTCGAAGCTTCT 187404 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | ||| || || |||||||| ||||| ||||| || ||||| Sbjct 187403 GACACGATAGAAAATGTAAAAGCCAAGATCCAAGACAAAGAGGGAATTCCTCCGGATCAG 187344 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || |||||||||||||| || ||| | | || | ||||| |||||| Sbjct 187343 CAGCGTCTGATTTTCGCCGGCAAACAGTTGGAAGATGGCAGAACTCTTTCCGACTACAAC 187284 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || |||||||| | ||||| ||| |||| | || |||||| Sbjct 187283 ATCCAGAAGGAATCCACACTTCATTTGGTTCTGCGTCTTCGAGGAGGT 187236 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || ||| | || || || || ||||||| || || ||| | | Sbjct 187691 ATGCAAATCTTTGTGAAGACTCTTACAGGCAAGACCATCACTCTCGAGGTCGAAGCTTCT 187632 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | ||| || || |||||||| ||||| ||||| || ||||| Sbjct 187631 GATACAATAGAAAATGTAAAAGCCAAGATCCAAGACAAAGAGGGAATTCCTCCGGATCAG 187572 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || |||||||||||||| || ||| | | || | ||||| |||||| Sbjct 187571 CAGCGTCTGATTTTCGCCGGCAAACAGTTGGAAGATGGCAGAACTCTTTCCGACTACAAC 187512 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || |||||||| | ||| | ||| |||| | || ||||| Sbjct 187511 ATCCAGAAGGAATCCACGCTTCATCTGGTTCTGCGTCTTCGAGGAGG 187465 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || ||| | || || || || |||| || ||||| ||| | | Sbjct 187235 ATGCAAATATTTGTAAAGACTCTCACAGGCAAGACCATCACCCTCGAAGTCGAAGCTTCT 187176 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | || || || |||||||| ||||| ||||| || ||||| Sbjct 187175 GACACAATAGAAAATGTAAAGGCCAAGATCCAAGACAAAGAGGGAATTCCTCCGGATCAG 187116 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || ||||||||||| || ||| | | || | ||||| |||||| Sbjct 187115 CAGCGTCTGATTTTCGCTGGCAAACAGTTGGAAGATGGCAGAACTCTTTCCGACTACAAC 187056 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || |||||||| | ||||| ||| |||| | || |||||| Sbjct 187055 ATCCAGAAGGAATCCACACTTCATTTGGTTCTGCGCCTTCGAGGAGGT 187008 >seq324 Length=2934362 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||||||| || ||||| || || ||||| ||||| | || || || | | Sbjct 1892422 ATGCAGATTTTTGTGAAGACTTTGACGGGCAAAACCATCACTTTGGAGGTTGAGGCTTCT 1892481 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | || || || ||||| ||||| || ||||||||||| || Sbjct 1892482 GACACTATTGAAAATGTGAAGGCCAAGATCCAAGATAAGGAAGGCATTCCACCCGACCAG 1892541 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | || || || || || |||||| | || || |||||| | ||||| |||||| Sbjct 1892542 CAAAGACTGATCTTCGCGGGGAAACAGCTGGAAGACGGACGCACCCTGTCCGACTACAAC 1892601 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| ||||| || || | ||||||||||||||| | || || ||| Sbjct 1892602 ATTCAGAAAGAGTCTACTTTGCATTTAGTTTTGCGACTCCGGGGCGGT 1892649 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || ||||| ||||| || || |||| | || || || || || Sbjct 1891738 ATGCAGATCTTTGTGAAGACTTTGACCGGCAAGACCATCACATTGGAGGTCGAGGCCTCC 1891797 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | || || ||||| ||| || |||||||||||||| || || || ||||| Sbjct 1891798 GATACCATCGAGAATGTCAAAGCAAAGATCCAAGACAAGGAGGGGATCCCTCCAGATCAG 1891857 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || ||||| || |||||| | || ||| ||||||| | || || |||||| Sbjct 1891858 CAGAGATTGATCTTTGCTGGGAAACAGCTCGAAGATGGCCGCACCCTGTCGGACTACAAC 1891917 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || ||||| || || || | ||| | ||| | || || || || || Sbjct 1891918 ATCCAAAAGGAGTCGACTCTGCATCTGGTTCTCCGTTTACGTGGTGG 1891964 Score = 123 bits (136), Expect = 2e-23 Identities = 146/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||||||| || || || || |||||||| | ||| | || || ||| | | Sbjct 1892650 ATGCAGATTTTTGTCAAGACCTTGACTGGTAAAACTATTACTTTGGAGGTCGAAGCGTCG 1892709 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | || | | ||| |||||||||||||| ||||| || |||||||| ||| Sbjct 1892710 GATACCATCGAGAACGTGAAAGCCAAAATTCAAGACAAAGAGGGCATCCCACCCGACCAA 1892769 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | || || || || || |||||| | ||||| || ||| | ||||| |||||| Sbjct 1892770 CAAAGACTGATCTTCGCGGGGAAACAGCTTGAGGACGGGCGTACCTTATCCGACTACAAC 1892829 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || |||||| Sbjct 1892830 ATCCAGAAGGAGTCCACC 1892847 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||||||| || ||||| ||||| || || |||| | || || || || || Sbjct 1892194 ATGCAGATTTTTGTGAAGACTTTGACCGGCAAGACCATCACATTGGAGGTCGAGGCCTCC 1892253 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || ||||| || || || ||||||||||| || || || ||||| Sbjct 1892254 GACACCATCGAGAATGTCAAAGCGAAGATCCAGGACAAGGAGGGGATCCCCCCGGATCAG 1892313 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || ||||| || |||||| | || || ||||||| | || || |||||| Sbjct 1892314 CAGAGATTGATCTTTGCTGGGAAACAGCTCGAAGACGGCCGCACCCTGTCTGACTACAAC 1892373 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || |||||||| | ||| | || | ||| | || || ||| Sbjct 1892374 ATCCAGAAGGAATCCACTCTGCATCTGGTACTCCGACTTCGTGGCGGT 1892421 Score = 100 bits (110), Expect = 2e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || || || || || || || ||| ||||| | || ||||| | | Sbjct 1891966 ATGCAAATTTTCGTCAAGACCTTGACAGGAAAGACGATCACTTTGGAGGTGGAGGCTTCG 1892025 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | | || || || || ||||| || || |||||||| || || Sbjct 1892026 GACACCATCGAGAACGTGAAGGCGAAGATCCAGGACAAAGAAGGCATTCCACCTGACCAG 1892085 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | | || || || ||||||||| | ||||| ||||| | |||||||||||| Sbjct 1892086 CAAAGGTTGATCTTCGCAGGCAAACAGCTCGAGGACGGACGCACATTGTCCGATTACAAC 1892145 Query 22399 ATTCAAAAAGAATCCACC 22416 || || |||||||| ||| Sbjct 1892146 ATCCAGAAAGAATCTACC 1892163 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || || || || || || |||| | || || || || || Sbjct 1892878 ATGCAGATCTTCGTCAAGACCTTGACGGGGAAGACTATCACGTTGGAGGTCGAGGCCTCC 1892937 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | | || || ||||| ||||| || || |||||||| || || Sbjct 1892938 GACACCATCGAGAACGTGAAGGCGAAGATTCAGGACAAAGAAGGCATTCCACCTGACCAG 1892997 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | | || || || |||||||| | ||||| |||||| | |||||||||||| Sbjct 1892998 CAAAGGTTAATCTTCGCGGGCAAACAACTCGAGGACGGGCGCACCTTGTCCGATTACAAC 1893057 Query 22399 ATTCAAAAAGAATCCAC 22415 || || ||||||||||| Sbjct 1893058 ATCCAGAAAGAATCCAC 1893074 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419655754711495