Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dinoponera_20quadriceps_20[refseq_20GCF_5F001313825.1_202015-10-13] 14,123 sequences; 259,665,865 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq3542 89.7 4e-13 seq324 86.0 4e-12 >seq3542 Length=209091 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||||||| | || || | || ||||| ||||| ||| | ||| ||||| | Sbjct 187235 ATGCAAATATTTGTAAAGACTCTCACAGGCAAGACCATCACCCTCGAAGTCGAAGCTTCT 187176 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | ||| || || || |||||||| | ||| | || Sbjct 187175 GACACAATAGAAAATGTAAAGGCCAAGATCCAAGACAAAGAGGGAATTCCTCCGGATCAG 187116 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 ||| | || || || ||||||||||| | |||||| | |||| | |||| ||||| Sbjct 187115 CAGCGTCTGATTTTCGCTGGCAAACAGTTGGAAGATGGCAGAACTCTTTCCGACTACAAC 187056 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 || ||||||||||| || |||||| |||| | || | |||||||| Sbjct 187055 ATCCAGAAGGAATCCACACTTCATTTGGTTCTGCGCCTTCGAGGAGG 187009 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||||||| | || || | ||||| |||||||| ||| | ||| ||||| | Sbjct 187007 ATGCAAATATTTGTGAAGACCCTCACGGGTAAAACCATCACCCTCGAAGTCGAAGCTTCC 186948 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | || ||||| ||||||||||| | ||| | || Sbjct 186947 GACACAATAGAAAATGTGAAAGCCAAAATCCAGGATAAAGAGGGAATTCCTCCGGATCAG 186888 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 ||| | || || || || ||||| || ||||||||| | ||| | | |||||||| Sbjct 186887 CAGCGTCTGATTTTCGCCGGCAAGCAGCTAGAAGATGGTAGAACCCTTTCAGATTACAAC 186828 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 ||||||||||| || || || ||| | || || || | || ||||| Sbjct 186827 ATTCAGAAGGAGTCAACACTGCATTTAGTCTTGCGACTTCGTGGAGG 186781 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| |||||| | ||||| | || ||||| || ||||| | ||| ||||| | Sbjct 187463 ATGCAGATATTTGTCAAAACTCTCACAGGCAAGACTATTACTCTCGAAGTCGAAGCTTCT 187404 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || ||| | | || | || || || || |||||||| | ||| | || Sbjct 187403 GACACGATAGAAAATGTAAAAGCCAAGATCCAAGACAAAGAGGGAATTCCTCCGGATCAG 187344 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 ||| | || || || || |||||||| | |||||| | |||| | |||| ||||| Sbjct 187343 CAGCGTCTGATTTTCGCCGGCAAACAGTTGGAAGATGGCAGAACTCTTTCCGACTACAAC 187284 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 || ||||||||||| || |||||| |||| | ||| | |||||||| Sbjct 187283 ATCCAGAAGGAATCCACACTTCATTTGGTTCTGCGTCTTCGAGGAGG 187237 >seq324 Length=2934362 Score = 86.0 bits (94), Expect = 4e-12 Identities = 160/235 (68%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 21826 AGTGCAAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGG 21885 || ||| ||||| || || | || ||| | ||||| |||||||| ||| | ||| | Sbjct 1891502 AGAGCACCATGCAGATTTTCGTGAAGACACTGACGGGGAAAACCATCACCCTCGAAGTTG 1891561 Query 21886 AAGCCGCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTG 21945 |||| | || || | | | | ||| || ||| |||||||| || | || Sbjct 1891562 AAGCGTCCGACACTATCGAGAACGTGAAGGCCAAGATTCAGGATAAAGAAGGGATCCCAC 1891621 Query 21946 TAAACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCG 22005 |||| ||| | || |||||||||||||| ||||| || || | || || ||| Sbjct 1891622 CCGACCAGCAGCGTCTCATCTTTGCTGGCAAGCAACTCGAGGACGGACGCACATTGTCCG 1891681 Query 22006 ATTACAATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 |||| || || |||||||||||||| ||||| ||||| | || | ||||| || Sbjct 1891682 ATTATAACATCCAGAAGGAATCTACCCTTCACTTGGTACTTCGGCTTCGAGGCGG 1891736 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358063158104542