Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dinoponera_20quadriceps_20[refseq_20GCF_5F001313825.1_202015-10-13] 14,123 sequences; 259,665,865 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq413 114 2e-20 seq5802 104 4e-17 >seq413 Length=1084034 Score = 114 bits (126), Expect = 2e-20 Identities = 113/146 (77%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 244694 TTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTG 244753 ||||| ||||| || ||||||| | ||| ||||| || || ||||||||| | || ||| Sbjct 768333 TTGCACACGGCGACTTCCTCCGGGCTGGAGTACTCGATAACCTCGGTGCACAAATTGCTG 768392 Query 244754 CACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGC 244813 || ||||| ||||||||||| || ||||| || ||| |||||| || ||||||||| Sbjct 768393 CATTTGATCGTGCCCAGGTGTTGATGATTCGATTTGCGATTGCAGTGATCTTTGTAGAGC 768452 Query 244814 ATGAAGGGCCCCCCGGTCTCGAGCTG 244839 || | ||| ||||||||| | ||| Sbjct 768453 ATATACGGCGTCCCGGTCTCCACCTG 768478 >seq5802 Length=86632 Score = 104 bits (114), Expect = 4e-17 Identities = 123/167 (74%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 42426 GCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGAAA 42485 || |||||||||||||| |||||||| || ||||| || ||| || ||| || Sbjct 11733 GCGTTCTTCGCCGCCTCCGACGGCATCGTTAATGAAAATCTGATTGAGAGATTCTGCCAA 11674 Query 42486 GAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACGTG 42545 |||||| | || |||||||| || ||||||||||||||||| || ||||||||| | Sbjct 11673 GAGGTGAAAATCTCGGAGGCGCGGTGTTTCTACGGCTTCCAGATCGCTATAGAGAACATC 11614 Query 42546 CACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCC 42592 ||||| ||| |||| || || || | || |||||| ||||| Sbjct 11613 CACTCCGAGATGTATTCCTTGCTTATCGAGACCTACATCTCCGATCC 11567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944172488718480