Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dinoponera_20quadriceps_20[refseq_20GCF_5F001313825.1_202015-10-13] 14,123 sequences; 259,665,865 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq3542 102 6e-17 seq13913 100 2e-16 seq921 98.7 8e-16 >seq3542 Length=209091 Score = 102 bits (112), Expect = 6e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 ||||||| || ||||| ||||||||||||||| |||||||| |||||||| || | Sbjct 187465 CCTCCTCGAAGACGCAGAACCAGATGAAGCGTGGATTCCTTCTGGATGTTGTAGTCGGAA 187524 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | || | || ||||| || |||||||| || ||||| |||||||||||| || Sbjct 187525 AGAGTTCTGCCATCTTCCAACTGTTTGCCGGCGAAAATCAGACGCTGCTGATCCGGAGGA 187584 Query 34021 ACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTC-ACACTATCAGTAGATTCGCA 34079 | | |||||||| | | | || |||| || | |||||| || |||| Sbjct 187585 ATTCCCTCTTTGT-CTTGGATCTTGGCTTTTACATTTTCTATTGTATCAGAAGCTTCGAC 187643 Query 34080 TTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 |||| || || || || || || || || ||||||||||||||||| Sbjct 187644 CTCGAGAGTGATGGTCTTGCCTGTAAGAGTCTTCACAAAGATTTGCAT 187691 Score = 86.0 bits (94), Expect = 5e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 |||||||| || ||||| |||| |||||| ||| |||||||| |||||||| || | Sbjct 187236 ACCTCCTCGAAGACGCAGAACCAAATGAAGTGTGGATTCCTTCTGGATGTTGTAGTCGGA 187295 Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 | || | || ||||| || |||||||| || ||||| |||||||||||| || Sbjct 187296 AAGAGTTCTGCCATCTTCCAACTGTTTGCCGGCGAAAATCAGACGCTGCTGATCCGGAGG 187355 Query 34020 CACGCTCTCTTTGTC 34034 | | ||||||||| Sbjct 187356 AATTCCCTCTTTGTC 187370 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 |||||||| || ||||| |||| |||||| ||| |||||||| |||||||| || | Sbjct 187008 ACCTCCTCGAAGGCGCAGAACCAAATGAAGTGTGGATTCCTTCTGGATGTTGTAGTCGGA 187067 Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 | || | || ||||| || ||||| || || ||||| |||||||||||| || Sbjct 187068 AAGAGTTCTGCCATCTTCCAACTGTTTGCCAGCGAAAATCAGACGCTGCTGATCCGGAGG 187127 Query 34020 CACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCA 34079 | | ||||||||| || || ||| | | | |||| || |||| Sbjct 187128 AATTCCCTCTTTGTCTTGGATCTTGGCCTTTACATTTTCTATTGTGTCAGAAGCTTCGAC 187187 Query 34080 TTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 ||||| || || || || || || || || || ||||| |||||||| Sbjct 187188 TTCGAGGGTGATGGTCTTGCCTGTGAGAGTCTTTACAAATATTTGCAT 187235 >seq13913 Length=989 Score = 100 bits (110), Expect = 2e-16 Identities = 82/96 (85%), Gaps = 3/96 (3%) Strand=Plus/Minus Query 115526 AATGTCATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAG 115583 |||| |||||||| |||||||||||||||| |||||||||||||||| | ||||||| Sbjct 930 AATG-CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGTTAACGATCTAAT 872 Query 115584 GAACCAAAACTGATATATTGAGCCATTCGTGGTATC 115619 |||||| |||||||||| |||||| || | ||| || Sbjct 871 GAACCATAACTGATATAATGAGCCTTTTGCGGTTTC 836 Score = 100 bits (110), Expect = 2e-16 Identities = 82/96 (85%), Gaps = 3/96 (3%) Strand=Plus/Minus Query 114329 AATGTCATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAG 114386 |||| |||||||| |||||||||||||||| |||||||||||||||| | ||||||| Sbjct 930 AATG-CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGTTAACGATCTAAT 872 Query 114387 GAACCAAAACTGATATATTGAGCCATTCGTGGTATC 114422 |||||| |||||||||| |||||| || | ||| || Sbjct 871 GAACCATAACTGATATAATGAGCCTTTTGCGGTTTC 836 >seq921 Length=3243 Score = 98.7 bits (108), Expect = 8e-16 Identities = 84/100 (84%), Gaps = 4/100 (4%) Strand=Plus/Plus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGA--GTAAGATCTAAGGAA 114389 |||||||| |||||||||||||||| ||||||||||||| || ||| |||||| ||| Sbjct 605 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAATGTTGGTACAATCTAATGAA 664 Query 114390 CCAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 114429 ||| ||||||| || ||||||||||| ||| || ||||| Sbjct 665 CCATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTAA 704 Score = 98.7 bits (108), Expect = 8e-16 Identities = 84/100 (84%), Gaps = 4/100 (4%) Strand=Plus/Plus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGA--GTAAGATCTAAGGAA 115586 |||||||| |||||||||||||||| ||||||||||||| || ||| |||||| ||| Sbjct 605 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAATGTTGGTACAATCTAATGAA 664 Query 115587 CCAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 115626 ||| ||||||| || ||||||||||| ||| || ||||| Sbjct 665 CCATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTAA 704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396994056006646