Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dinoponera_20quadriceps_20[refseq_20GCF_5F001313825.1_202015-10-13] 14,123 sequences; 259,665,865 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq3542 93.3 3e-14 seq408 82.4 5e-11 >seq3542 Length=209091 Score = 93.3 bits (102), Expect = 3e-14 Identities = 160/232 (69%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || ||||| | |||||| |||||||| | ||| ||| || || || || || |||| Sbjct 187237 CCTCCTCGAAGACGCAGAACCAAATGAAGTGTGGATTCCTTCTGGATGTTGTAGTCGG-- 187294 Query 39553 AAAACGCGTTC----ATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGA 39608 || | |||| ||| ||||| ||||| ||| | ||||| | |||||||||||||| Sbjct 187295 --AAAGAGTTCTGCCATCTTCCAACTGTTTGCCGGCGAAAATCAGACGCTGCTGATCCGG 187352 Query 39609 GGGTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTC 39668 || | || |||||||| || || ||| | | ||| ||||| | ||| Sbjct 187353 AGGAATTCCCTCTTTGTCTTGGATCTTGGCTTTTACATTTTCTATCGTGTCAGAAGCTTC 187412 Query 39669 CACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATG 39720 || || | |||||| || || || || | |||||| || || ||||||||| Sbjct 187413 GACTTCGAGAGTAATAGTCTTGCCTGTGAGAGTTTTGACAAATATCTGCATG 187464 >seq408 Length=1748099 Score = 82.4 bits (90), Expect = 5e-11 Identities = 134/191 (70%), Gaps = 4/191 (2%) Strand=Plus/Plus Query 39532 TTTTGTATATTATAATCGGCCAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATT 39591 ||||| |||||||| |||| |||| ||| | || ||||| || || || |||| ||| Sbjct 1304022 TTTTGAATATTATAGTCGGACAAAGTACGTCCGTCCTCCAACTGCTTGCCAGCAAAGATT 1304081 Query 39592 AAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTC--GCATATTTTTTGTTTAATCGTCG 39649 | ||||||||||| | || | ||||| ||||| | || || || || ||| Sbjct 1304082 AGTCGCTGCTGATCAGGCGGAATTCCTTCCTTGTCCTGGATCTTAGCCTTTACATTTTCG 1304141 Query 39650 CTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGA 39709 | |||||| | ||||| || | || || ||||||||||| | ||||| |||| Sbjct 1304142 --ATTGTGTCGGATGCCTCCACCTCAAGGGTGATCGTTTTACCCGTGAGGGTTTTCACGA 1304199 Query 39710 AGATCTGCATG 39720 | ||||||||| Sbjct 1304200 AAATCTGCATG 1304210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347309809333259