Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dinoponera_20quadriceps_20[refseq_20GCF_5F001313825.1_202015-10-13] 14,123 sequences; 259,665,865 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq1491 262 5e-65 seq2310 113 6e-20 seq187 104 3e-17 seq2289 95.1 2e-14 >seq1491 Length=3611237 Score = 262 bits (290), Expect = 5e-65 Identities = 719/1100 (65%), Gaps = 6/1100 (1%) Strand=Plus/Minus Query 6704 ATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTCGGTGCGGCT 6763 |||||||| ||||| | |||||| | || | ||| |||||| || || || | | | Sbjct 3014533 ATACCATTGGCATCGATATCGAAGGTAACTTCAATCTGTGGTACGCCTCTGGGCCCAGGT 3014474 Query 6764 GGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTCTTACGTTCA 6823 ||||| ||||| | || ||| | ||||| | | ||||| | | | || | || Sbjct 3014473 GGAATTCCCGTAAGTTCGAATTTGCCAAGAATGTTATTATCTTTAGTCATCGCTCTCTCT 3014414 Query 6824 CCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTGAGAAGATTTGT 6883 |||||||| |||| ||| || | |||||||| || ||| | || |||| Sbjct 3014413 CCTTCATAAACTTGAATAAGTACTCCCGGTTGATTGTCCGAGTACGTAGTAAATGTTTGA 3014354 Query 6884 TCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCATA 6943 | ||| | || ||||| ||||| ||| || | | |||||| | ||| || Sbjct 3014353 GTCTGCTTCGTAGGTATCGTGGTATTCCTCTTGATCAAAGTGGTCATGACACCGCCAGCG 3014294 Query 6944 GTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTCG 7003 || |||| || || |||| || ||||||||||| || | ||| ||||| || ||| Sbjct 3014293 GTCTCGATACCCAGTGACAATGGAGTCACGTCCAATAGAAGCAGATCTTGCACTTCCTCG 3014234 Query 7004 TTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCG 7063 | || || | |||||| ||||| |||| || ||||| ||||| |||||||| Sbjct 3014233 GACTTGTCGCCGTGCAGGATGGCCGCTTGAACCGCTGCGCCGTAAGCGACGGCCTCATCC 3014174 Query 7064 GGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATT 7123 || || || | || |||| || || ||||| || | || || || | ||||| Sbjct 3014173 GGATTGATAGACTTGTTCAACTCCTTGCCGTTGAAGAAGTCTTGTAGCAGCTTCTGAATC 3014114 Query 7124 TTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATC 7183 || || || | || || |||||||| | || || | || | | || || ||| Sbjct 3014113 TTTGGTATCCTCGTGGACCCACCGACTAGGACTATGCTGTGAACCTGAGCCTTGTCCATC 3014054 Query 7184 TTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACAC 7243 || | ||| | | || || || || || || | | | | ||||| || || Sbjct 3014053 TTCGCGTCCCTCAATGCCTTCTCCACGGGCTCAAGAGTGCTCCTGAACAGATCGGCGCAG 3013994 Query 7244 AGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAA 7303 |||||||| || | || | ||| || || || ||||| || | ||| ||| ||| ||| Sbjct 3013993 AGTTCCTCGAACCTGGCCCTGGTGATCGACGTGTAGAAGTCGATGCCCTCGAATAGCGAG 3013934 Query 7304 TCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCC 7363 ||||| |||||| | | ||||| || || ||||||| ||| || | ||| || || Sbjct 3013933 TCAATCTCAATGCTCGCTTGTGTCGATGAGCTCAACGTTCTCTTCGCTCTCTCGCAAGCG 3013874 Query 7364 GTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA---ATATCTTTCTTATGTTTACGT 7420 || | | ||| | || || | | ||| || | | ||| ||||| | || | Sbjct 3013873 GTCCTCAGACGTCTCAGAGCCCTCTTGTT---GGTACCCAGATCCTTCTTGTACTTCCTC 3013817 Query 7421 TTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGT 7480 || ||||| | | ||| || | | || ||||| || || ||||| | || Sbjct 3013816 TTGAACTCCTGAACGAAATGGTTGACCATTCGATTGTCGAAGTCCTCGCCACCAAGATGA 3013757 Query 7481 GTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACA 7540 || || || || || | ||| || || ||||| || | || || | || | ||| || Sbjct 3013756 GTGTCGCCGGCTGTGGATTTCACCTCGAAGATGCCGTCCTCGATCGTCAAGATCGACACG 3013697 Query 7541 TCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTA 7600 || || ||||| |||||||| || || || || || ||| | ||| | |||||| Sbjct 3013696 TCGAAGGTACCGCCACCCAGATCGAAGATCAGCACATTCTTCTCGCCCAAAGCTTTCTTA 3013637 Query 7601 TCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGG 7660 |||||||||||||| || || |||||||| || || || || || | ||| |||||| Sbjct 3013636 TCGAGACCGTACGCTATCGCAGCCGCCGTGGGCTCGTTTATTATCCTGAGAACGTTCAGA 3013577 Query 7661 CCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGG 7720 ||||| |||| | || || || |||||||| | ||||| || || ||||| ||||| Sbjct 3013576 CCAGCGATAGCGCCGGCGTCCTTTGTCGCTTGCCTCTGCGAGTCATTGAAGTAAGCCGGT 3013517 Query 7721 ACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATT 7780 || || | || |||| ||| || | | || ||||| | ||||| | || ||||| Sbjct 3013516 ACAGTAATAACGGCGTTCGTTACAGTTTGGCCCAGATATGCCTCCGCCGTTTCCTTCATC 3013457 Query 7781 TTGGTAAGAACCATCGATGA 7800 || || | ||||| || || Sbjct 3013456 TTCGTCAATACCATGGAGGA 3013437 >seq2310 Length=156745 Score = 113 bits (124), Expect = 6e-20 Identities = 142/192 (74%), Gaps = 5/192 (3%) Strand=Plus/Minus Query 7958 AAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGT 8017 |||| ||||| |||||||||||||| |||||| || || ||||| ||||| ||||| Sbjct 91270 AAAATGGTGTTGTTGGGGTTCATGGCGACTTGGTTTTTGGCGGCGTCTCCGATGAGACGC 91211 Query 8018 TCATTATTTTCCGTAAACGCGACGTACGATGGG-GTCGTTCGATTCCCTTGGTCGTTCGC 8076 || | | |||| || || || || | |||| ||||| ||||| || |||||||| || Sbjct 91210 TCGGTCT---CCGTGAAGGCCACATA-GCTGGGCGTCGTGCGATTTCCCTGGTCGTTGGC 91155 Query 8077 AATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATC 8136 || || || || | ||| || ||||||||||||| || || || || || | ||| Sbjct 91154 GATGATCTCGACCTTGCCGTGCTGGAAGACGCCGACGCAGGAGTAGGTCGTGCCAAGATC 91095 Query 8137 AATACCGATTGC 8148 ||||||| ||| Sbjct 91094 GATACCGACTGC 91083 >seq187 Length=3222021 Score = 104 bits (114), Expect = 3e-17 Identities = 80/95 (84%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 22441 AAATTTTATCAGGCATCTACATCAGAGCTCTACGGTAAAGTAAATGAAACTCCACAAAAT 22500 |||||||| || ||||| ||||| || || || |||||||| ||||||| ||| |||||| Sbjct 2750183 AAATTTTACCATGCATCAACATCCGAACTTTATGGTAAAGTGAATGAAATTCCGCAAAAT 2750242 Query 22501 GAAAATACACCGTTTTACCCGCGTTCACCATATGG 22535 || || ||||| |||||||| || ||||||||||| Sbjct 2750243 GAGAAAACACCATTTTACCCACGCTCACCATATGG 2750277 >seq2289 Length=1730960 Score = 95.1 bits (104), Expect = 2e-14 Identities = 136/191 (71%), Gaps = 3/191 (2%) Strand=Plus/Minus Query 7958 AAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGT 8017 |||| ||| || |||| ||||| || || |||||||||||||| ||||| || ||| Sbjct 390949 AAAATTGTATTCGTGGGATTCATCGCCACCTGATTCTTCGCCGCGTCGCCGATTAGCCGT 390890 Query 8018 TCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCA 8077 || | ||||| ||||||| ||| || || || ||||| || || ||||| || Sbjct 390889 TC---GGTCTCCGTGAACGCGATGTAGCTCGGCGTAGTGCGATTACCCTGATCGTTGGCG 390833 Query 8078 ATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCA 8137 || || || || | | | | | |||| |||||||| || |||||||| || | ||| Sbjct 390832 ATGATCTCCACTTTGCCATGTCGAAAGACCCCGACGCAGGAGTACGTTGTGCCCAGATCG 390773 Query 8138 ATACCGATTGC 8148 || ||||| || Sbjct 390772 ATTCCGATCGC 390762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635020675243320