Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dinoponera_20quadriceps_20[refseq_20GCF_5F001313825.1_202015-10-13] 14,123 sequences; 259,665,865 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq1491 149 5e-30 seq4116 113 4e-19 seq3542 113 4e-19 seq777 87.8 1e-11 >seq1491 Length=3611237 Score = 149 bits (164), Expect = 5e-30 Identities = 515/789 (65%), Gaps = 22/789 (3%) Strand=Plus/Plus Query 551797 CTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGTGTTGAAGATTT 551854 |||||||||||||||| || || || ||| || |||| | ||| | ||| | || || Sbjct 3013756 CTCATCTTGGTGGCGAGGACTTCGACAATCGAATGGTCAACCAT--TTCGTTCAGGAGTT 3013813 Query 551855 TAAACGAAAAAACAAAGTTGATCTATCTACATCTGCCAAAG--CTCTTCGTCGTCTAAGA 551912 || | || |||| ||||| ||| | | | || |||| | ||||| || Sbjct 3013814 CAAGAGGAAGTACAAGAAGGATCTGGGTAC--CAACAAGAGGGCTCTGAGACGTCTGAGG 3013871 Query 551913 ACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGT--ACTCAAACCACTATTGAAG 551970 || |||||||| ||||| || ||| | || | || | || ||| | | ||||| Sbjct 3013872 ACCGCTTGCGAGAGAGCGAA--GAGAACGTTGAGCTCATCGACACAAGCGAGCATTGAGA 3013929 Query 551971 TAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAAG 552030 | || || |||| ||||| || || | | ||| | || | ||||||| || || | Sbjct 3013930 TTGACTCGCTATTCGAGGGCATCGACTTCTACACGTCGATCACCAGGGCCAGGTTCGAGG 3013989 Query 552031 ATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGATT 552090 | | || | ||||| || || | || |||| || || || | | || || || Sbjct 3013990 AACTCTGCGCCGATCTGTTCAGGAGCACTCTTGAGCCCGTGGAGAAGGCATTGAGGGACG 3014049 Query 552091 CAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTC 552150 | ||||| || || | | || || || || || || ||||| || || || || | Sbjct 3014050 CGAAGATGGACAAGGCTCAGGTTCACAGCATAGTCCTAGTCGGTGGGTCCACGAGGATAC 3014109 Query 552151 CTAAAATTCGCGAAATGTTA-AGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTT 552209 | || |||| | || || | ||| || ||| || || | || || | | | Sbjct 3014110 CAAAGATTCAGAAGCTGCTACAAGACTTCTT-CAACGGCAAGGAGTTGAACAAGTCTATC 3014168 Query 552210 AATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGG--AC 552267 ||||| |||||||| || || || || || || ||||||| || || || || || Sbjct 3014169 AATCCGGATGAGGCCGTCGCTTACGGCGCAGCGGTTCAAGCGGCCATCCTGCACGGCGAC 3014228 Query 552268 AAA-CTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGT 552326 || | || ||| | ||| || | | || | || || ||||| | || || ||| Sbjct 3014229 AAGTCCGAGGAAG---TGCAAGATCTGCTTCTATTGGACGTGACTCCATTGTCACTGGGT 3014285 Query 552327 TTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGT 552386 | || || | ||| ||| | ||||| | | | ||| | || ||||| || || ||| Sbjct 3014286 ATCGAGACCGCTGGCGGTGTCATGACCACTTTGATCAAGAGGAATACCACGATACCTACG 3014345 Query 552387 AAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATT 552446 || | ||| |||| ||||||| || || |||||| | | || |||||| || Sbjct 3014346 AAGCAGACTCAAACATTTACTACGTACTCGGACAATCAACCGGGAGTACTTATTCAAGTT 3014405 Query 552447 TTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGG-TACTTTTAATTTAGA 552505 | ||||||||| ||| | |||||||||||||| ||||| | || || ||| Sbjct 3014406 TATGAAGGAGAGAGAGCGATGACTAAAGATAATAACATTCTTGGCAAATTCGAACTTA-C 3014464 Query 552506 AGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGC 552565 || ||||| |||| || | || ||||| || ||||||||||| |||||||||||||| Sbjct 3014465 GGGAATTCCACCTGGGCCCAGAGGCGTACCACAGATTGAAGTTACCTTCGATATCGATGC 3014524 Query 552566 CAATGGAAT 552574 |||||| || Sbjct 3014525 CAATGGTAT 3014533 >seq4116 Length=2211964 Score = 113 bits (124), Expect = 4e-19 Identities = 135/180 (75%), Gaps = 5/180 (3%) Strand=Plus/Minus Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457 |||| || | |||||||| || ||||| || || ||||| || ||||| || ||||||| Sbjct 1312709 ATGCTGTTGTCACTGTACCGGCGTATTTCAACGATTCACAGCGACAAGCCACAAAAGATG 1312650 Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517 |||| | || |||||| | || || |||||| | || ||||| || || || ||||||| Sbjct 1312649 CTGGTCAAATAGCTGGATTAAACGTACTTCGTGTAATTAATGAGCCGACAGCAGCTGCAC 1312590 Query 550518 TTGCATATGGACTTGATAAACATAATGATCAAGA---ACTTAATGTACTCATCT-TTGAT 550573 ||||||| || | |||||||| | ||| |||| | |||||||| || | ||||| Sbjct 1312589 TTGCATACGGCATGGATAAACAGGAAGAT-AAGATGTAAGAAATGTACTTATGTATTGAT 1312531 >seq3542 Length=209091 Score = 113 bits (124), Expect = 4e-19 Identities = 158/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| || || |||||||| || ||| || || ||||| || | |||||||| Sbjct 187474 AGACGCAGAACCAGATGAAGCGTGGATTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCTG 187533 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 |||||| | ||||| ||||| ||||| || | |||||||| ||||||||||| ||| Sbjct 187534 CCATCTTCCAACTGTTTGCCGGCGAAAATCAGACGCTGCTGATCCGGAGGAATTCCCTCT 187593 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGT 563435 || ||||| || || |||||| || |||||||||| | || |||||||| Sbjct 187594 TTGTCTTGGATCTTGGCTTTTACATTTTCTATTGTATCAGAAGCTTCGAC-CTCGAGAGT 187652 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | || || || |||||||| || || || |||||||| Sbjct 187653 GATGGTCTTGCCTGTAAGAGTCTTCACAAAGATTTGCAT 187691 Score = 109 bits (120), Expect = 4e-18 Identities = 157/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| || || | |||||| || ||| || || ||||| || | |||||||| Sbjct 187246 AGACGCAGAACCAAATGAAGTGTGGATTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCTG 187305 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 |||||| | ||||| ||||| ||||| || | |||||||| ||||||||||| ||| Sbjct 187306 CCATCTTCCAACTGTTTGCCGGCGAAAATCAGACGCTGCTGATCCGGAGGAATTCCCTCT 187365 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGT 563435 || ||||| || || |||||| || || || |||| | || ||||||||| Sbjct 187366 TTGTCTTGGATCTTGGCTTTTACATTTTCTATCGTGTCAGAAGCTTCGAC-TTCGAGAGT 187424 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || ||| || || || |||||||| || || || ||||| Sbjct 187425 AATAGTCTTGCCTGTGAGAGTTTTGACAAATATCTGCAT 187463 Score = 96.9 bits (106), Expect = 3e-14 Identities = 134/185 (72%), Gaps = 2/185 (1%) Strand=Plus/Plus Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351 ||| |||||||| | || ||||| |||||| || || || ||||| ||||| || | Sbjct 186825 AATGTTGTAATCTGAAAGGGTTCTACCATCTTCTAGCTGCTTGCCGGCGAAAATCAGACG 186884 Query 563352 TTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGT 563411 |||||||| ||||||||||| |||||||| || ||||| ||| || || ||||| Sbjct 186885 CTGCTGATCCGGAGGAATTCCCTCTTTATCCTGGATTTTGGCTTTCACATTTTCTATTGT 186944 Query 563412 ATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTT 563470 || | | || |||||| || | |||||||| || || || || || || |||| Sbjct 186945 GTCGGAAGCTTCGAC-TTCGAGGGTGATGGTTTTACCCGTGAGGGTCTTCACAAATATTT 187003 Query 563471 GCATA 563475 ||||| Sbjct 187004 GCATA 187008 Score = 87.8 bits (96), Expect = 1e-11 Identities = 153/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 || || || || | |||||| || ||| || || ||||| || | |||||||| Sbjct 187018 AGGCGCAGAACCAAATGAAGTGTGGATTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCTG 187077 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 |||||| | ||||| || || ||||| || | |||||||| ||||||||||| ||| Sbjct 187078 CCATCTTCCAACTGTTTGCCAGCGAAAATCAGACGCTGCTGATCCGGAGGAATTCCCTCT 187137 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGT 563435 || ||||| || || ||||| || ||||| |||| | || |||||| || Sbjct 187138 TTGTCTTGGATCTTGGCCTTTACATTTTCTATTGTGTCAGAAGCTTCGAC-TTCGAGGGT 187196 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | || || || || ||||| || || || ||||||||| Sbjct 187197 GATGGTCTTGCCTGTGAGAGTCTTTACAAATATTTGCATA 187236 >seq777 Length=4062919 Score = 87.8 bits (96), Expect = 1e-11 Identities = 116/161 (72%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 930666 GATTTTTCTTCACCAAATATTGCCAAAGAAATGCATATTGGACATTTGCGTTCTACCATT 930725 || |||||| || || ||||||||||| |||||| | ||||| || | || ||||| Sbjct 747865 GACTTTTCTAGTCCCAACATTGCCAAAGAGATGCATGTGGGACACCTGAGATCCACCATA 747924 Query 930726 ATTGGAGAATCTTTATGTAGATTATATGAATATTGTGGAAGTAAAGTTCATCGAGTCAAT 930785 |||||||| | | ||||| | | ||||| | ||| | | || | || ||||| Sbjct 747925 ATTGGAGATAGTATTTGTAGGCTGTTAGAATACTTAGGACATGATGTGCTGAGACTCAAT 747984 Query 930786 CATATTGGTGATTGGGGAACACAATTTGGTATGTTAATTGC 930826 ||| | ||||| ||||| || || ||||||||||| || || Sbjct 747985 CATGTAGGTGACTGGGGCACGCAGTTTGGTATGTTGATAGC 748025 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4028549112065270