Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dinoponera_20quadriceps_20[refseq_20GCF_5F001313825.1_202015-10-13] 14,123 sequences; 259,665,865 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq408 116 3e-21 seq324 116 3e-21 seq777 84.2 2e-11 >seq408 Length=1748099 Score = 116 bits (128), Expect = 3e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 48579 TTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATC 48638 ||||||||||| || || || | | | || |||| ||||||||||| || ||||| || Sbjct 1304022 TTTTGAATATTATAGTCGGACAAAGTACGTCCGTCCTCCAACTGCTTGCCAGCAAAGATT 1304081 Query 48639 AGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCC 48698 |||||||| ||||| | |||| || |||||||| ||||| |||||| | Sbjct 1304082 AGTCGCTGCTGATCAGGCGGAATTCCTTCCTTGTCCTGGATCTTAGCCTTTACATTTTCG 1304141 Query 48699 ACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAA 48758 | | || || ||||||||||| | || |||||||| ||||| | ||||| || ||| Sbjct 1304142 ATTGTGTCGGATGCCTCCACCTCAAGGGTGATCGTTTTACCCGTGAGGGTTTTCACGAAA 1304201 Query 48759 ATCTGCATCGTG 48770 |||||||| ||| Sbjct 1304202 ATCTGCATGGTG 1304213 >seq324 Length=2934362 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 ||||||| || ||||| || ||||| | || |||||| ||||| ||||| || || Sbjct 1892648 CCGCCCCGGAGTCGCAAAACTAAATGCAAAGTAGACTCTTTCTGAATGTTGTAGTCGGAC 1892589 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | || |||| |||| ||| || || || || ||||||| || || || | ||| Sbjct 1892588 AGGGTGCGTCCGTCTTCCAGCTGTTTCCCCGCGAAGATCAGTCTTTGCTGGTCGGGTGGA 1892529 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||| ||||| || ||||| || ||| | | || || || ||||| ||| Sbjct 1892528 ATGCCTTCCTTATCTTGGATCTTGGCCTTCACATTTTCAATAGTGTCAGAAGCCTCAACC 1892469 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| || || ||||| ||||||||||| || |||||||||||||| Sbjct 1892468 TCCAAAGTGATGGTTTTGCCCGTCAAAGTCTTCACAAAAATCTGCAT 1892422 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 ||||| | || || | |||| ||| || ||| || || || || ||||| ||||| Sbjct 1892420 CCGCCACGAAGTCGGAGTACCAGATGCAGAGTGGATTCCTTCTGGATGTTGTAGTCAGAC 1892361 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | || |||| || | ||| || || ||||| |||| || ||| ||||||| ||| Sbjct 1892360 AGGGTGCGGCCGTCTTCGAGCTGTTTCCCAGCAAAGATCAATCTCTGCTGATCCGGGGGG 1892301 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||||||||||| ||||| ||| ||| | | | || || ||||| ||| Sbjct 1892300 ATCCCCTCCTTGTCCTGGATCTTCGCTTTGACATTCTCGATGGTGTCGGAGGCCTCGACC 1892241 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| || || || || || |||||||| || |||||||||||||| Sbjct 1892240 TCCAATGTGATGGTCTTGCCGGTCAAAGTCTTCACAAAAATCTGCAT 1892194 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 ||||| | || || | ||||| || || ||| ||| || || || ||||| || ||| Sbjct 1892876 CCGCCTCGAAGTCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAT 1892817 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 | | || |||| || | ||| || || || || ||||||| ||||| || | || Sbjct 1892816 AAGGTACGCCCGTCCTCAAGCTGTTTCCCCGCGAAGATCAGTCTTTGTTGGTCGGGTGGG 1892757 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | |||||| ||||| ||| || ||| || | | | || ||||| || ||| Sbjct 1892756 ATGCCCTCTTTGTCTTGAATTTTGGCTTTCACGTTCTCGATGGTATCCGACGCTTCGACC 1892697 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| ||||| ||||| || ||||| || || |||||||||||||| Sbjct 1892696 TCCAAAGTAATAGTTTTACCAGTCAAGGTCTTGACAAAAATCTGCAT 1892650 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 |||| ||| || || ||| ||||| || ||||| || || || | || | || || Sbjct 1891946 ACCAGATGCAGAGTCGACTCCTTTTGGATGTTGTAGTCCGACAGGGTGCGGCCATCTTCG 1891887 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | ||| || || ||||| |||| || ||| ||||| | || | ||||||||||| Sbjct 1891886 AGCTGTTTCCCAGCAAAGATCAATCTCTGCTGATCTGGAGGGATCCCCTCCTTGTCTTGG 1891827 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 |||||| ||| ||| | | | || || ||||| ||||||| || || || || Sbjct 1891826 ATCTTTGCTTTGACATTCTCGATGGTATCGGAGGCCTCGACCTCCAATGTGATGGTCTTG 1891767 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || |||||||| || ||||| |||||||| Sbjct 1891766 CCGGTCAAAGTCTTCACAAAGATCTGCAT 1891738 >seq777 Length=4062919 Score = 84.2 bits (92), Expect = 2e-11 Identities = 84/109 (77%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 48552 CGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCG 48611 |||| ||||| |||| || ||||||||||||||||||||| || ||| | || || Sbjct 197564 CGCAGTACCAAGTGTAATGTAGACTCTTTTTGAATATTGTAATCTGAGAGAGTCCGGCCG 197623 Query 48612 TCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAA 48660 || ||||| ||||| || ||||| |||| || ||| ||||| | |||| Sbjct 197624 TCTTCCAATTGCTTCCCAGCAAAGATCAATCTCTGCTGATCAGGTGGAA 197672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380872031472729