Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dinoponera_20quadriceps_20[refseq_20GCF_5F001313825.1_202015-10-13] 14,123 sequences; 259,665,865 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq1328 105 1e-17 seq413 104 4e-17 seq5802 98.7 2e-15 >seq1328 Length=3537139 Score = 105 bits (116), Expect = 1e-17 Identities = 106/138 (77%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 241490 TTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCAT 241549 || |||||||| || || ||||| |||| | |||||| || || |||||||| ||||| Sbjct 620020 TTCAGCACCTTGACCTTGTCCTCGAGCCTGGAGATGCGCTCGAGCTTGCGCCGCCGGCAC 620079 Query 241550 TTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCC 241609 |||| ||| |||| |||||||| | | ||| | ||| |||||| ||||||| | Sbjct 620080 TTGGAGGCGGCCACGCGGTTCCTCTGCCGCTTCCTCTCCAGCTTGATCTTCTCCTGGTTC 620139 Query 241610 TCCATGTCGATCGGAGAC 241627 |||||||||||||| ||| Sbjct 620140 TCCATGTCGATCGGCGAC 620157 >seq413 Length=1084034 Score = 104 bits (114), Expect = 4e-17 Identities = 115/151 (76%), Gaps = 2/151 (1%) Strand=Plus/Plus Query 213501 TTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTG 213560 ||||| ||||| || |||| | | | |||||| || | ||||||||||| |||||| Sbjct 768333 TTGCACACGGCGACTTCCTCCGGGCTGGAGTACTCGATAACCTCGGTGCACAAATTGCTG 768392 Query 213561 CATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAG-AATCCTTGTAGAG 213619 ||| ||| |||||||||| || || || || |||||| | |||| ||| |||||||| Sbjct 768393 CATTTGATCGTGCCCAGGTGTTGATGATTCGA-TTTGCGATTGCAGTGATCTTTGTAGAG 768451 Query 213620 CATGTAGGGGGACCCGGTCTCTAGCTGGGAC 213650 ||| || || | ||||||||| | ||| ||| Sbjct 768452 CATATACGGCGTCCCGGTCTCCACCTGCGAC 768482 >seq5802 Length=86632 Score = 98.7 bits (108), Expect = 2e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 48425 TACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCA 48484 |||||||| ||||| | |||||||||||||||||||| |||||||| || ||||| Sbjct 11600 TACATCTCGGAGTGGATGTTCTCTATAGCGATCTGGAAGCCGTAGAAACACCGCGCCTCC 11659 Query 48485 AACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAA 48544 | | | ||| ||| | |||||||||| | |||||| ||||| || || || || || Sbjct 11660 GAGATTTTCACCTCTTGGCAGAATCTCTCAATCAGATTTTCATTAACGATGCCGTCGGAG 11719 Query 48545 GCAGCAAAGAAGGC 48558 || || ||||| || Sbjct 11720 GCGGCGAAGAACGC 11733 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931368349528320