Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dinoponera_20quadriceps_20[refseq_20GCF_5F001313825.1_202015-10-13] 14,123 sequences; 259,665,865 total letters Query= NC_019915.1 Length=40917 Score E Sequences producing significant alignments: (Bits) Value seq12456 176 1e-39 >seq12456 Length=1155 Score = 176 bits (194), Expect = 1e-39 Identities = 145/177 (82%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 20483 GATGGTAACGGACGTTACTTATTACAAGATAGCATTATCAACACTGCTGGTAACACTGTA 20542 |||||||| || |||||||||||||||||| || || ||||| |||||||||| ||| Sbjct 963 GATGGTAATGGTCGTTACTTATTACAAGATTCTATCATTAACACAGCTGGTAACAGAGTA 1022 Query 20543 TTAGGTATGAACGTAACAGTTGTACGCGATGACTTATTAGGTGAAAACGGAGATGCATTA 20602 ||||||||||| ||||| |||||||| || || ||| |||||| | || || || | Sbjct 1023 TTAGGTATGAATGTAACTGTTGTACGTGACGATTTACTAGGTGCCCAAGGTGAAGCTAAA 1082 Query 20603 GCGTTTATCGGCGATGTAAAACGTGGTGTGTTATTCGCAGACCGTACTGACGTATCA 20659 ||||||||||| ||||||||||||||||| || || ||||||||| | ||||| ||| Sbjct 1083 GCGTTTATCGGTGATGTAAAACGTGGTGTATTCTTTGCAGACCGTTCAGACGTTTCA 1139 Score = 127 bits (140), Expect = 5e-25 Identities = 168/232 (72%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 20027 TATATTCCTGAAAAAGAAGTAAAAACAGTACAAGATTTATCAGAGTTGGTAGAAAAAACA 20086 ||||| ||||| | ||| | |||||||| ||||||||||| || ||||| ||| | Sbjct 515 TATATCGCTGAACATGAAATTAAAACAGTTCAAGATTTATCTACATTAGTAGATAAAGAA 574 Query 20087 TCAGTATCAACTGCAAGTGGTAAATACCCAATCTTGAAACGTGCTAACGCTAAATTCAAC 20146 ||||| || || |||||| | ||||| | |||||| | |||||||||||| Sbjct 575 TCAGTTAAAAACCCATCAGGTAAACATCCAATTGTTTTACGTGCAACTGCTAAATTCAAC 634 Query 20147 ACTGTTGCTGAATTAGAGAAAAACCCTGAGTTAGCTCGTCCGGAATTCGAAACGATAAAT 20206 || |||| |||||| | |||||||||| ||||| || ||||| || || Sbjct 635 ACAGTTGAAGAATTAAAAGAAAACCCTGAATTAGCAGCACCTGAATTTAAAGAAATCGGA 694 Query 20207 TGGGAAGTTGAAACATATCGTGGTGCAATTCCAATCTCACAAGAAGC-ATTA 20257 |||||||||||||| |||||||| || ||||| | || ||||||| |||| Sbjct 695 TGGGAAGTTGAAACTTATCGTGGAGCTATTCCTTTATCTGAAGAAGCGATTA 746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130790861303554