Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dinoponera_20quadriceps_20[refseq_20GCF_5F001313825.1_202015-10-13] 14,123 sequences; 259,665,865 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq3542 109 4e-18 seq1491 105 4e-17 seq777 98.7 6e-15 seq408 95.1 8e-14 >seq3542 Length=209091 Score = 109 bits (120), Expect = 4e-18 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 ||||| || || || | ||||||||| ||| || | || || || | |||||| Sbjct 187015 CGAAGGCGCAGAACCAAATGAAGTGTGGATTCCTTCTGGATGTTGTAGTCGGAAAGAGTT 187074 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 ||| |||||| | || || ||||| ||||| ||||| || ||||| ||||||||||| Sbjct 187075 CTGCCATCTTCCAACTGTTTGCCAGCGAAAATCAGACGCTGCTGATCCGGAGGAATTCCC 187134 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGG 480731 || |||||||| ||||| || ||| ||| || || |||| | ||| ||| Sbjct 187135 TCTTTGTCTTGGATCTTGGCCTTTACATTTTCTATTGTGTCAGAAGCTTCGACTTCGAGG 187194 Query 480732 GTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || || ||||||||||| || || ||||| Sbjct 187195 GTGATGGTCTTGCCTGTGAGAGTCTTTACAAATATTTG 187232 Score = 109 bits (120), Expect = 4e-18 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 |||||||| || || | ||||||||| ||| || | || || || | |||||| Sbjct 187243 CGAAGACGCAGAACCAAATGAAGTGTGGATTCCTTCTGGATGTTGTAGTCGGAAAGAGTT 187302 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 ||| |||||| | || || || || ||||| ||||| || ||||| ||||||||||| Sbjct 187303 CTGCCATCTTCCAACTGTTTGCCGGCGAAAATCAGACGCTGCTGATCCGGAGGAATTCCC 187362 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGG 480731 || |||||||| ||||| ||| ||| ||| || || |||| | ||| || Sbjct 187363 TCTTTGTCTTGGATCTTGGCTTTTACATTTTCTATCGTGTCAGAAGCTTCGACTTCGAGA 187422 Query 480732 GTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 |||||||| || || |||||||| || || || || || Sbjct 187423 GTAATAGTCTTGCCTGTGAGAGTTTTGACAAATATCTG 187460 Score = 105 bits (116), Expect = 4e-17 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 |||||||| || || |||||||| || ||| || | || || || | |||||| Sbjct 187471 CGAAGACGCAGAACCAGATGAAGCGTGGATTCCTTCTGGATGTTGTAGTCGGAAAGAGTT 187530 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 ||| |||||| | || || || || ||||| ||||| || ||||| ||||||||||| Sbjct 187531 CTGCCATCTTCCAACTGTTTGCCGGCGAAAATCAGACGCTGCTGATCCGGAGGAATTCCC 187590 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGG 480731 || |||||||| ||||| ||| ||| ||| || ||||||| | || || Sbjct 187591 TCTTTGTCTTGGATCTTGGCTTTTACATTTTCTATTGTATCAGAAGCTTCGACCTCGAGA 187650 Query 480732 GTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || || || |||||||| || || ||||| Sbjct 187651 GTGATGGTCTTGCCTGTAAGAGTCTTCACAAAGATTTG 187688 Score = 93.3 bits (102), Expect = 3e-13 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||| || | || | ||| ||||| || || || || ||||| | || || Sbjct 186786 ACGAAGTCGCAAGACTAAATGCAGTGTTGACTCCTTCTGAATGTTGTAATCTGAAAGGGT 186845 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 ||| |||||| || ||||| || || ||||| ||||| || ||||| ||||||||||| Sbjct 186846 TCTACCATCTTCTAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGATCCGGAGGAATTCC 186905 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 || || || || || || ||| ||| ||| || || || | | ||| || Sbjct 186906 CTCTTTATCCTGGATTTTGGCTTTCACATTTTCTATTGTGTCGGAAGCTTCGACTTCGAG 186965 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| || |||||||| ||||| ||||| || || ||||| Sbjct 186966 GGTGATGGTTTTACCCGTGAGGGTCTTCACAAATATTTG 187004 >seq1491 Length=3611237 Score = 105 bits (116), Expect = 4e-17 Identities = 189/274 (69%), Gaps = 4/274 (1%) Strand=Plus/Plus Query 475886 GACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATT 475945 ||||| |||||| | ||| | ||| | || || | ||| || | ||||| | | | || Sbjct 3014262 GACGTGACTCCATTGTCACTGGGTATCGAGACCGCTGGCGGTGTCATGACCACTTTGATC 3014321 Query 475946 GACAGAAATACTCCTATCCCATGCAA--AAAATCAAAAGTATTTTCCACTTATTCTGATA 476003 | || ||||| | || || || | | ||||| |||| | || || || || | Sbjct 3014322 AAGAGGAATACCACGATACCTACGAAGCAGACTCAAAC--ATTTACTACGTACTCGGACA 3014379 Query 476004 ATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATA 476063 ||||| | ||| || ||| | | |||||| || ||| | ||||||||||||| Sbjct 3014380 ATCAACCGGGAGTACTTATTCAAGTTTATGAAGGAGAGAGAGCGATGACTAAAGATAATA 3014439 Query 476064 ACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAA 476123 ||| ||||| | || | ||| || ||||| |||| |||||||| || || || | Sbjct 3014440 ACATTCTTGGCAAATTCGAACTTACGGGAATTCCACCTGGGCCCAGAGGCGTACCACAGA 3014499 Query 476124 TTGAAGTTACTTTTGATATTGATGCAAATGGTAT 476157 |||||||||| || ||||| ||||| |||||||| Sbjct 3014500 TTGAAGTTACCTTCGATATCGATGCCAATGGTAT 3014533 >seq777 Length=4062919 Score = 98.7 bits (108), Expect = 6e-15 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 817098 TAGATTTTTCATCTCCAAATATTGCAAAGGAAATGCATATTGGACACTTGAGATCTACAA 817157 |||| ||||| ||| || ||||| || || |||||| | |||||| ||||||| || | Sbjct 747863 TAGACTTTTCTAGTCCCAACATTGCCAAAGAGATGCATGTGGGACACCTGAGATCCACCA 747922 Query 817158 TAATTGGTGAATCTCTTTGTAGAATATATGAATTTTGTGGATGTGAAGTACAAAGAATAA 817217 ||||||| || | ||||||| | | |||| | ||| ||| || | ||| | | Sbjct 747923 TAATTGGAGATAGTATTTGTAGGCTGTTAGAATACTTAGGACATGATGTGCTGAGACTCA 747982 Query 817218 ATCATATTGGTGATTGGGGAACACAATTTGGTATGTTAATTGCA 817261 ||||| | ||||| ||||| || || ||||||||||| || ||| Sbjct 747983 ATCATGTAGGTGACTGGGGCACGCAGTTTGGTATGTTGATAGCA 748026 >seq408 Length=1748099 Score = 95.1 bits (104), Expect = 8e-14 Identities = 109/144 (76%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 480627 TGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATC 480686 ||||| |||||||| || || || || |||||||| ||||||||||||||||| || ||| Sbjct 1304064 TGCTTGCCAGCAAAGATTAGTCGCTGCTGATCAGGCGGAATTCCTTCCTTGTCCTGGATC 1304123 Query 480687 TTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAATAGTTTTACC 480745 || || ||| ||| || || || | || | | |||||||| || |||||||| Sbjct 1304124 TTAGCCTTTACATTTTCGATTGTGTCGGATGCCTCCA-CCTCAAGGGTGATCGTTTTACC 1304182 Query 480746 GGTGAGAGTCTTAACGAAAATTTG 480769 ||||| || || |||||||| || Sbjct 1304183 CGTGAGGGTTTTCACGAAAATCTG 1304206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3267573396005204