Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dinoponera_20quadriceps_20[refseq_20GCF_5F001313825.1_202015-10-13] 14,123 sequences; 259,665,865 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq3542 116 5e-21 seq324 109 8e-19 >seq3542 Length=209091 Score = 116 bits (128), Expect = 5e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||||||| | || || | || || ||||| || || | |||||||||| ||| Sbjct 187007 ATGCAAATATTTGTGAAGACCCTCACGGGTAAAACCATCACCCTCGAAGTCGAAGCTTCC 186948 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | || ||| |||||| ||||| || |||||||| || || ||||| || || Sbjct 186947 GACACAATAGAAAATGTGAAAGCCAAAATCCAGGATAAAGAGGGAATTCCTCCGGATCAG 186888 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || | |||||| ||||| |||||||| |||||| ||||| | |||||||| || Sbjct 186887 CAGCGTCTGATTTTCGCCGGCAAGCAGCTAGAAGATGGTAGAACCCTTTCAGATTACAAC 186828 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTT 156034 || || ||| | || || |||||||| || Sbjct 186827 ATTCAGAAGGAGTCAACACTGCATTTAGTCTT 186796 Score = 84.2 bits (92), Expect = 3e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||||||| | || || | || || || || || || | |||||||||| |||| Sbjct 187235 ATGCAAATATTTGTAAAGACTCTCACAGGCAAGACCATCACCCTCGAAGTCGAAGCTTCT 187176 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | || ||| || || || || ||||| ||||| || || ||||| || || Sbjct 187175 GACACAATAGAAAATGTAAAGGCCAAGATCCAAGACAAAGAGGGAATTCCTCCGGATCAG 187116 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || | |||||| || || || ||| | |||||| ||||||| | || || || || Sbjct 187115 CAGCGTCTGATTTTCGCTGGCAAACAGTTGGAAGATGGCAGAACTCTTTCCGACTACAAC 187056 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGT 156031 || || || | || |||||||| || Sbjct 187055 ATCCAGAAGGAATCCACACTTCATTTGGT 187027 >seq324 Length=2934362 Score = 109 bits (120), Expect = 8e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | || || |||||||| ||||||||||| || || ||||||| || Sbjct 1892650 ATGCAGATTTTTGTCAAGACCTTGACTGGTAAAACTATTACTTTGGAGGTCGAAGCGTCG 1892709 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| || ||||||||| ||||| ||||| ||||| ||||| || || || ||| Sbjct 1892710 GATACCATCGAGAACGTGAAAGCCAAAATTCAAGACAAAGAGGGCATCCCACCCGACCAA 1892769 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 |||||| |||| | || || || ||||| || || | || ||||| || || || Sbjct 1892770 CAAAGACTGATCTTCGCGGGGAAACAGCTTGAGGACGGGCGTACCTTATCCGACTACAAC 1892829 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || || ||| | || || || | ||| | || | |||||||| Sbjct 1892830 ATCCAGAAGGAGTCCACCCTCCACCTGGTGCTCCGACTTCGAGGCGGT 1892877 Score = 91.5 bits (100), Expect = 2e-13 Identities = 145/206 (70%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | || || ||||| || || || || ||||| || ||||| | || Sbjct 1891738 ATGCAGATCTTTGTGAAGACTTTGACCGGCAAGACCATCACATTGGAGGTCGAGGCCTCC 1891797 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| || || || ||| || || ||||| || || || || |||||||| || Sbjct 1891798 GATACCATCGAGAATGTCAAAGCAAAGATCCAAGACAAGGAGGGGATCCCTCCAGATCAG 1891857 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || |||||||| | ||| || || |||||||||||| | | || | || || || | Sbjct 1891858 CAGAGATTGATCTTTGCTGGGAAACAGCTCGAAGATGGCCGCACCCTGTCGGACTACA-- 1891915 Query 156003 ATATCCAAA--GAGGCGACGCTTCAT 156026 | ||||||| ||| |||| || ||| Sbjct 1891916 ACATCCAAAAGGAGTCGACTCTGCAT 1891941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731742797146800