Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dinoponera_20quadriceps_20[refseq_20GCF_5F001313825.1_202015-10-13] 14,123 sequences; 259,665,865 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq324 113 8e-20 seq3542 100 5e-16 >seq324 Length=2934362 Score = 113 bits (124), Expect = 8e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || || |||| ||| || | ||| || || | |||| || || || |||||||| Sbjct 1891739 ATGCCGCCTCGAAGCCGAAGTACCAAGTGAAGGGTAGATTCCTTCTGGATGTTATAATCG 1891680 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || || | ||| |||| || | ||| || |||||||| || | | ||| ||||| ||| Sbjct 1891679 GACAATGTGCGTCCGTCCTCGAGTTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCGGGT 1891620 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||||||||| || || || || || || ||||| || |||| ||| Sbjct 1891619 GGGATCCCTTCTTTATCCTGAATCTTGGCCTTCACGTTCTCGATAGTGTCGGACGCTTCA 1891560 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| || || |||||||| || || | ||| || | ||| |||||||| Sbjct 1891559 ACTTCGAGGGTGATGGTTTTCCCCGTCAGTGTCTTCACGAAAATCTGCAT 1891510 Score = 109 bits (120), Expect = 1e-18 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||| |||| |||||| | || | || | || | ||| || || || || || Sbjct 1892879 ATACCGCCTCGAAGTCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCG 1892820 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 ||||| | || |||| || | ||||| || || || || | ||| |||||||| ||| Sbjct 1892819 GATAAGGTACGCCCGTCCTCAAGCTGTTTCCCCGCGAAGATCAGTCTTTGTTGGTCGGGT 1892760 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || || ||||| ||||| ||||| ||| || || || ||||| |||| ||| Sbjct 1892759 GGGATGCCCTCTTTGTCTTGAATTTTGGCTTTCACGTTCTCGATGGTATCCGACGCTTCG 1892700 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || | |||||| ||||||||||| || || || | || |||||||| Sbjct 1892699 ACCTCCAAAGTAATAGTTTTACCAGTCAAGGTCTTGACAAAAATCTGCAT 1892650 Score = 86.0 bits (94), Expect = 1e-11 Identities = 161/237 (68%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 171833 TTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATT 171892 || |||| | ||||||||||| || | ||| | || | || | ||||| || || Sbjct 1893114 TTACATATTGCCACCTCTAAGGCGAAGTACAAGGTGAAGCGTGGATTCTTTCTGGATGTT 1893055 Query 171893 ATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTG 171952 ||||| || || | || |||| || | |||||| || || || ||||| || || || Sbjct 1893054 GTAATCGGACAAGGTGCGCCCGTCCTCGAGTTGTTTGCCCGCGAAGATTAACCTTTGCTG 1892995 Query 171953 GTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGA 172012 ||||||||| || |||||||| || || || || || || || || || || || Sbjct 1892994 GTCAGGTGGAATGCCTTCTTTGTCCTGAATCTTCGCCTTCACGTTCTCGATGGTGTCGGA 1892935 Query 172013 CGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 | || || || | || || || || || || || || || | ||| |||||||| Sbjct 1892934 GGCCTCGACCTCCAACGTGATAGTCTTCCCCGTCAAGGTCTTGACGAAGATCTGCAT 1892878 >seq3542 Length=209091 Score = 100 bits (110), Expect = 5e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||| |||| ||| || | || ||||| | || | || || || || || || Sbjct 187234 ATACCTCCTCGAAGACGCAGAACCAAATGAAGTGTGGATTCCTTCTGGATGTTGTAGTCG 187293 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | || || | || ||||| ||||| || || ||||| | | ||| || || || Sbjct 187294 GAAAGAGTTCTGCCATCTTCCAACTGTTTGCCGGCGAAAATCAGACGCTGCTGATCCGGA 187353 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || ||||| ||||| ||||| || || ||||||||| ||| || || || | ||| Sbjct 187354 GGAATTCCCTCTTTGTCTTGGATCTTGGCTTTTACATTTTCTATCGTGTCAGAAGCTTCG 187413 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| |||||||| || || || || | ||||| | ||||||||||| Sbjct 187414 ACTTCGAGAGTAATAGTCTTGCCTGTGAGAGTTTTGACAAATATCTGCAT 187463 Score = 98.7 bits (108), Expect = 2e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902 || || | |||||| || |||||||| | || | ||| || ||| || |||||||| Sbjct 186781 CCTCCACGAAGTCGCAAGACTAAATGCAGTGTTGACTCCTTCTGAATGTTGTAATCTGAA 186840 Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962 | | || | || || | || || || || ||||| | | ||| || || || || Sbjct 186841 AGGGTTCTACCATCTTCTAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGATCCGGAGGA 186900 Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACT 172022 ||||| |||||||| || ||||| ||| ||||| ||| || || || | ||| ||| Sbjct 186901 ATTCCCTCTTTATCCTGGATTTTGGCTTTCACATTTTCTATTGTGTCGGAAGCTTCGACT 186960 Query 172023 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || || ||||||||||| || | || || | ||||| ||||| Sbjct 186961 TCGAGGGTGATGGTTTTACCCGTGAGGGTCTTCACAAATATTTGCAT 187007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 904976209553400