Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dinoponera_20quadriceps_20[refseq_20GCF_5F001313825.1_202015-10-13] 14,123 sequences; 259,665,865 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq1634 111 2e-18 seq2673 89.7 6e-12 >seq1634 Length=549241 Score = 111 bits (122), Expect = 2e-18 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| ||||||| ||| | || | ||| || ||||| ||||| || | || Sbjct 438268 GCTTGGCCAATTCGCCGGGCAGCAGTAGCCTCACCGCCGTCTGTATCTCACGGGAAGTGA 438327 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 |||| | ||||| |||||||||| || ||||||| |||| | |||| || Sbjct 438328 TCGTCGATCTTTTGTTGTAGTGCGCCAGTCGTGACGCCTCGGCAGCGATTCTCTCGAACA 438387 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||| || || |||||||| ||||| |||| ||||||| || || |||| Sbjct 438388 CGTCGTTCACGAAGCTGTTCATGATGCTCATCGCCTTGCTGGAGATTCCGGTATCCGGGT 438447 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 |||||||||| ||||||||||| ||| Sbjct 438448 GCACCTGCTTCAGCACCTTGTAAATG 438473 Score = 95.1 bits (104), Expect = 1e-13 Identities = 141/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTG 1254407 |||| |||||| | | || ||| | ||||| ||||||||||| || | | ||| ||| Sbjct 441120 GCCAATTCGCCCGGTAGGAGCAGCCTGACGGCAGTCTGGATCTCCCGGGAGGTGATGGTG 441061 Query 1254408 TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCG 1254467 ||| || || | || |||| || ||||||| | ||||| |||| | ||| Sbjct 441060 GAGCGTTTATTGTAATGAGCCAATCGCGACGCCTCGGCCGCAATGCGTTCGAAAACATCG 441001 Query 1254468 TTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACC 1254527 ||||| || |||||||| ||| | ||| ||||||| || ||| ||||||||| Sbjct 441000 TTGACGAAACTGTTCATGATGCTCATGGCTTTGCTGGAGATACCGGTGTCCGGGTGCACC 440941 Query 1254528 TGCTTGAGCACCTTGTAGAT 1254547 ||||| | ||| |||||||| Sbjct 440940 TGCTTCAACACTTTGTAGAT 440921 >seq2673 Length=2501080 Score = 89.7 bits (98), Expect = 6e-12 Identities = 212/309 (69%), Gaps = 11/309 (4%) Strand=Plus/Minus Query 732963 AAGCGCGACAAGTCGACCATCCTGCGCACGAACGAGCCCGCCACGGTGCACCGCGTGGTG 733022 || |||||| |||||| | |||| | | |||| ||| || || ||| ||| || Sbjct 2417442 AAACGCGACGCGTCGACGTTTTTGCGGAATAGCGAGACCGGCATAGTCGACCAGGTGATG 2417383 Query 733023 GTGACGCGCAACGGCGACGGCGCCAACGCCGTCAAGAT-CGTGACGCGCGCCATGCGCCA 733081 ||||| ||| |||| || ||| | |||||| || | |||| | ||||| | Sbjct 2417382 TTGACGTTGAACAGCGAGGGATACAAGTTCTGCAAGATTCGCGT-GCGCAGCGTGCGC-A 2417325 Query 733082 GCCCG-AGTTGGGCGACAAACTGTCGTCGCGCCACGGCCAAAAGGGCACC-GTGGGCAGC 733139 |||| || | |||||||| | ||||||||||||| || ||||| || ||||| | Sbjct 2417324 TCCCGCAGATAGGCGACAAGTTTGCGTCGCGCCACGGGCAGAAGGGAACTTGTGGGATTC 2417265 Query 733140 -GTGCGCTCCACCGAGGACATGCCCTGGTCGCCGCGCGGCGGCGCCACGCCCGACATCGT 733198 || | | ||||||||||| | || | ||| || | |||||||||||| | Sbjct 2417264 AGTACAGGCAG--GAGGACATGCCGTTCTC-CTGCGAGG--GTCTCACGCCCGACATAAT 2417210 Query 733199 GATCAACCCGCACGCCATCCCGTCGCGCATGACCATGGGCAAGATGCTCGAGGCCCTCCT 733258 |||||||| ||||| ||||| ||||| |||||||| || | || ||||| | | | Sbjct 2417209 CATCAACCCCCACGCTATCCCCTCGCGTATGACCATCGGTCACTTGATCGAGTGCATACA 2417150 Query 733259 GGGCAAGGT 733267 ||| ||||| Sbjct 2417149 GGGGAAGGT 2417141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6105980200481991