Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dinoponera_20quadriceps_20[refseq_20GCF_5F001313825.1_202015-10-13] 14,123 sequences; 259,665,865 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq5802 291 7e-74 seq3542 87.8 1e-12 seq324 86.0 5e-12 >seq5802 Length=86632 Score = 291 bits (322), Expect = 7e-74 Identities = 329/441 (75%), Gaps = 0/441 (0%) Strand=Plus/Plus Query 34203 CGGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGATA 34262 ||||||||| || || ||| | ||||| ||||| || | | | ||| |||| Sbjct 20892 CGGCGGGTTCTTGAGGATGTACGTGTTCAGCTTGTGATTGCTCTCCAAGAGGCCATGATG 20951 Query 34263 ACCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATGAGCTCAGT 34322 ||||| || |||||||| || |||| || |||||| | || || ||||| || Sbjct 20952 GCCGCAGGCCTTGCAGCCTTGCGAGATTGTGCCCTTTTTGGAACTAACCATCAGCTCGGT 21011 Query 34323 CTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGGTC 34382 |||||| ||||| || |||| |||| ||| || |||| ||||| || ||||| ||||| Sbjct 21012 CTCCGGATTGTCGCACGCCGGGCACAGCACGTACCTGCGAATGAATCCGTCAAGTAGGTC 21071 Query 34383 CTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATCGAC 34442 ||| | ||| || |||||| |||||||| |||||||| || ||||| ||| | |||| Sbjct 21072 CTGCAGCTTCGTGGCGTCGTGTGAGCCGTTTACGATGAACCGCTCGTTCTTGAAGTCGAA 21131 Query 34443 CTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACGTCC 34502 |||||| || || |||| ||||| ||||||||||| || || || ||||||| || || Sbjct 21132 CTGCGTCTGGGCTCCCAATTCGCAGCCGAAGTACTTGGTGGGATACGTGGCCGGCCGGCC 21191 Query 34503 AAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTTCC 34562 | |||||| || | || |||||||||||| || ||||||||||||||||| || || Sbjct 21192 GATCGCCTTCGCCACGTCCACCATGTTGACGATCACGGTCTTGATGCCGTTGCCTTTGCC 21251 Query 34563 TTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACATTGCG 34622 ||| |||||||| |||||| ||||| ||||| |||||||| || || | ||||| Sbjct 21252 TTCTACCTTGGCCTGGATGCGAGGCATCTTGTAACGGTAGAAGGCATCGCTGATGTTGCG 21311 Query 34623 GTTAACGTTCACAGTCCCCAT 34643 ||| ||||| || ||||||| Sbjct 21312 GTTGACGTTGACGCTCCCCAT 21332 >seq3542 Length=209091 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/200 (71%), Gaps = 6/200 (3%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAA-ACGGAGC--CT 110329 ||||| ||||||||||||||| | || ||||| || ||||| ||||| || ||| || Sbjct 187463 ATGCAGATATTTGTCAAAACTCTCACAGGCAAGACTATTACTCTCGAAGTCGAAGCTTCT 187404 Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389 ||| || | | | |||||| ||||| |||||||| || | || |||| Sbjct 187403 GAC---ACGATAGAAAATGTAAAAGCCAAGATCCAAGACAAAGAGGGAATTCCTCCGGAT 187347 Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449 || || | || |||| || || |||||| |||| |||| |||||| | | || ||| Sbjct 187346 CAGCAGCGTCTGATTTTCGCCGGCAAACAGTTGGAAGATGGCAGAACTCTTTCCGACTAC 187287 Query 110450 AACATTCAAAAAGAATCTAC 110469 ||||| || || ||||| || Sbjct 187286 AACATCCAGAAGGAATCCAC 187267 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/200 (70%), Gaps = 6/200 (3%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAA-ACGGAGC--CT 110329 |||||||||||||| || ||| | || ||||| ||||| ||| ||||| || ||| || Sbjct 187235 ATGCAAATATTTGTAAAGACTCTCACAGGCAAGACCATCACCCTCGAAGTCGAAGCTTCT 187176 Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389 ||| || | | | ||||| ||||| |||||||| || | || |||| Sbjct 187175 GAC---ACAATAGAAAATGTAAAGGCCAAGATCCAAGACAAAGAGGGAATTCCTCCGGAT 187119 Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449 || || | || |||| || || |||||| |||| |||| |||||| | | || ||| Sbjct 187118 CAGCAGCGTCTGATTTTCGCTGGCAAACAGTTGGAAGATGGCAGAACTCTTTCCGACTAC 187059 Query 110450 AACATTCAAAAAGAATCTAC 110469 ||||| || || ||||| || Sbjct 187058 AACATCCAGAAGGAATCCAC 187039 >seq324 Length=2934362 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| || ||||| || || || || || || || || | || |||| || Sbjct 1891966 ATGCAAATTTTCGTCAAGACCTTGACAGGAAAGACGATCACTTTGGAGGTGGAGGCTTCG 1892025 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || ||| | || || |||||| |||||||||||| | || || || Sbjct 1892026 GACACCATCGAGAACGTGAAGGCGAAGATCCAGGACAAAGAAGGCATTCCACCTGACCAG 1892085 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||||| | || | || || |||||||| ||||| | | ||| || | ||||||||| Sbjct 1892086 CAAAGGTTGATCTTCGCAGGCAAACAGCTCGAGGACGGACGCACATTGTCCGATTACAAC 1892145 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 || || ||||||||||| | ||| |||| | |||| ||||| || Sbjct 1892146 ATCCAGAAAGAATCTACCCTTCACCTGGTACTTCGACTTCGAGGCGG 1892192 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || ||||| || ||||| || ||||||||||| || | || ||| || Sbjct 1892422 ATGCAGATTTTTGTGAAGACTTTGACGGGCAAAACCATCACTTTGGAGGTTGAGGCTTCT 1892481 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || ||| | | | || || ||||| || || |||||| | || || || Sbjct 1892482 GACACTATTGAAAATGTGAAGGCCAAGATCCAAGATAAGGAAGGCATTCCACCCGACCAG 1892541 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 |||||||| || | ||||| ||||||||||| || | | || || | || |||||| Sbjct 1892542 CAAAGACTGATCTTCGCGGGGAAACAGCTGGAAGACGGACGCACCCTGTCCGACTACAAC 1892601 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||| ||||| ||||| ||||| | || || |||| || || || Sbjct 1892602 ATTCAGAAAGAGTCTACTTTGCATTTAGTTTTGCGACTCCGGGGCGG 1892648 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412770540026639