Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dinoponera_20quadriceps_20[refseq_20GCF_5F001313825.1_202015-10-13] 14,123 sequences; 259,665,865 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq324 104 2e-17 seq3542 93.3 3e-14 >seq324 Length=2934362 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| |||||||| || ||||| || ||||||||||| || | || |||||| Sbjct 1892422 ATGCAGATTTTTGTGAAGACTTTGACGGGCAAAACCATCACTTTGGAGGTTGAGGCTTCT 1892481 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || ||| | | | || || ||||| ||||| |||||| | || || ||| Sbjct 1892482 GACACTATTGAAAATGTGAAGGCCAAGATCCAAGATAAGGAAGGCATTCCACCCGACCAG 1892541 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || ||||| || | ||||| ||||||||||| |||| || || | ||||||||| Sbjct 1892542 CAAAGACTGATCTTCGCGGGGAAACAGCTGGAAGACGGACGCACCCTGTCCGACTACAAC 1892601 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||||| || |||||||| ||||| | || ||| || | || || || Sbjct 1892602 ATTCAGAAAGAGTCTACTTTGCATTTAGTTTTGCGACTCCGGGGCGG 1892648 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || ||||| || ||||| || ||||| ||||| || | || ||||| | Sbjct 1891738 ATGCAGATCTTTGTGAAGACTTTGACCGGCAAGACCATCACATTGGAGGTCGAGGCCTCC 1891797 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 ||||| ||| | || ||| |||||| || || || || | || |||||| Sbjct 1891798 GATACCATCGAGAATGTCAAAGCAAAGATCCAAGACAAGGAGGGGATCCCTCCAGATCAG 1891857 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 |||||| | || | ||| || |||||||| || || | | || || ||||||||||| Sbjct 1891858 CAGAGATTGATCTTTGCTGGGAAACAGCTCGAAGATGGCCGCACCCTGTCGGACTACAAC 1891917 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGT 107764 || ||||||||||| || |||| |||| Sbjct 1891918 ATCCAAAAGGAGTCGACTCTGCATCTGGT 1891946 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| |||||||| || ||||| || ||||| ||||| || | || ||||| | Sbjct 1892194 ATGCAGATTTTTGTGAAGACTTTGACCGGCAAGACCATCACATTGGAGGTCGAGGCCTCC 1892253 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || ||| | || ||| ||||| || || || || | ||| ||||||| Sbjct 1892254 GACACCATCGAGAATGTCAAAGCGAAGATCCAGGACAAGGAGGGGATCCCCCCGGATCAG 1892313 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 |||||| | || | ||| || |||||||| || |||| | || || | ||||||||| Sbjct 1892314 CAGAGATTGATCTTTGCTGGGAAACAGCTCGAAGACGGCCGCACCCTGTCTGACTACAAC 1892373 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGT 107764 || || ||||| || || |||| |||| Sbjct 1892374 ATCCAGAAGGAATCCACTCTGCATCTGGT 1892402 >seq3542 Length=209091 Score = 93.3 bits (102), Expect = 3e-14 Identities = 169/247 (68%), Gaps = 4/247 (2%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || |||||||||||| | |||||||| || ||||| ||||| || ||| Sbjct 187463 ATGCAGATATTTGTCAAAACTCTCACAGGCAAGACTATTACTCTCGAAGTCGAAGCTTCT 187404 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || | | | |||||| ||||| || ||||| || | || ||||||| Sbjct 187403 GACACGATAGAAAATGTAAAAGCCAAGATCCAAGACAAAGAGGGAATTCCTCCGGATCAG 187344 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | || |||| || || |||||| |||| || | || ||| | | ||||||||| Sbjct 187343 CAGCGTCTGATTTTCGCCGGCAAACAGTTGGAAGATGGCAGAACTCTTTCCGACTACAAC 187284 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAAATAATAAAAAT 107795 || || ||||| || || | || |||| || | | ||||| || || |||| Sbjct 187283 ATCCAGAAGGAATCCACACTTCATTTGGTTCTGCGTCTTCGAGGAGG----TATGCAAAT 187228 Query 107796 ATTTGTA 107802 ||||||| Sbjct 187227 ATTTGTA 187221 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 |||||||| ||||| || ||| | |||||||| ||||| || |||| || ||| Sbjct 187691 ATGCAAATCTTTGTGAAGACTCTTACAGGCAAGACCATCACTCTCGAGGTCGAAGCTTCT 187632 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 ||||| | | | |||||| ||||| || ||||| || | || ||||||| Sbjct 187631 GATACAATAGAAAATGTAAAAGCCAAGATCCAAGACAAAGAGGGAATTCCTCCGGATCAG 187572 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | || |||| || || |||||| |||| || | || ||| | | ||||||||| Sbjct 187571 CAGCGTCTGATTTTCGCCGGCAAACAGTTGGAAGATGGCAGAACTCTTTCCGACTACAAC 187512 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 || || ||||| || ||| | || |||| || | | ||||| || Sbjct 187511 ATCCAGAAGGAATCCACGCTTCATCTGGTTCTGCGTCTTCGAGGAGG 187465 Score = 87.8 bits (96), Expect = 1e-12 Identities = 167/246 (68%), Gaps = 4/246 (2%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 |||||||| ||||| || ||| | |||||||| ||||| ||| ||||| || ||| Sbjct 187235 ATGCAAATATTTGTAAAGACTCTCACAGGCAAGACCATCACCCTCGAAGTCGAAGCTTCT 187176 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || | | | ||||| ||||| || ||||| || | || ||||||| Sbjct 187175 GACACAATAGAAAATGTAAAGGCCAAGATCCAAGACAAAGAGGGAATTCCTCCGGATCAG 187116 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | || |||| || || |||||| |||| || | || ||| | | ||||||||| Sbjct 187115 CAGCGTCTGATTTTCGCTGGCAAACAGTTGGAAGATGGCAGAACTCTTTCCGACTACAAC 187056 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAAATAATAAAAAT 107795 || || ||||| || || | || |||| || | | ||||| || || |||| Sbjct 187055 ATCCAGAAGGAATCCACACTTCATTTGGTTCTGCGCCTTCGAGGAGG----TATGCAAAT 187000 Query 107796 ATTTGT 107801 |||||| Sbjct 186999 ATTTGT 186994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398808143704747