Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dinoponera_20quadriceps_20[refseq_20GCF_5F001313825.1_202015-10-13] 14,123 sequences; 259,665,865 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq3542 161 8e-35 seq324 122 7e-23 >seq3542 Length=209091 Score = 161 bits (178), Expect = 8e-35 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | | |||||| ||||||||||| |||||||| || || ||||| || || | | Sbjct 187237 CCTCCTCGAAGACGCAGAACCAAATGAAGTGTGGATTCCTTCTGGATGTTGTAGTCGGAA 187296 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | ||| || | |||||||| || | |||| | ||||||||||| ||| Sbjct 187297 AGAGTTCTGCCATCTTCCAACTGTTTGCCGGCGAAAATCAGACGCTGCTGATCCGGAGGA 187356 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || |||||||||||||| | || ||| ||| |||||| ||||||||| ||| ||| Sbjct 187357 ATTCCCTCTTTGTCTTGGATCTTGGCTTTTACATTTTCTATCGTGTCAGAAGCTTCGACT 187416 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| ||||| ||||| || | ||||| |||||||||||||| Sbjct 187417 TCGAGAGTAATAGTCTTGCCTGTGAGAGTTTTGACAAATATCTGCAT 187463 Score = 140 bits (154), Expect = 2e-28 Identities = 160/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 ||||| ||||||||||| |||||||| || || ||||| || || | || || | | Sbjct 187021 CGCAGAACCAAATGAAGTGTGGATTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCTGCCA 187080 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || | ||||||||||| | |||| | ||||||||||| ||||| ||||||||| Sbjct 187081 TCTTCCAACTGTTTGCCAGCGAAAATCAGACGCTGCTGATCCGGAGGAATTCCCTCTTTG 187140 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 ||||| | || || ||| |||||| ||||||||| ||| ||||| || || || Sbjct 187141 TCTTGGATCTTGGCCTTTACATTTTCTATTGTGTCAGAAGCTTCGACTTCGAGGGTGATG 187200 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| || | || || |||||||| ||||| Sbjct 187201 GTCTTGCCTGTGAGAGTCTTTACAAATATTTGCAT 187235 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | | |||||| |||| ||||||||||||||| || || ||||| || || | | Sbjct 187465 CCTCCTCGAAGACGCAGAACCAGATGAAGCGTGGATTCCTTCTGGATGTTGTAGTCGGAA 187524 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | ||| || | |||||||| || | |||| | ||||||||||| ||| Sbjct 187525 AGAGTTCTGCCATCTTCCAACTGTTTGCCGGCGAAAATCAGACGCTGCTGATCCGGAGGA 187584 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || |||||||||||||| | || ||| ||| |||||| || |||||| ||| || Sbjct 187585 ATTCCCTCTTTGTCTTGGATCTTGGCTTTTACATTTTCTATTGTATCAGAAGCTTCGACC 187644 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| || || ||||| || | || || ||||| || ||||| Sbjct 187645 TCGAGAGTGATGGTCTTGCCTGTAAGAGTCTTCACAAAGATTTGCAT 187691 Score = 131 bits (144), Expect = 1e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 |||| || ||||| || || || || || |||||||| ||||| | || ||| | | | Sbjct 186793 CGCAAGACTAAATGCAGTGTTGACTCCTTCTGAATGTTGTAATCTGAAAGGGTTCTACCA 186852 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || || || ||||| || | |||| | ||||||||||| ||||| |||||||| Sbjct 186853 TCTTCTAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGATCCGGAGGAATTCCCTCTTTA 186912 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 || || | ||| ||| ||| |||||| ||||| ||| ||| ||||| || || || Sbjct 186913 TCCTGGATTTTGGCTTTCACATTTTCTATTGTGTCGGAAGCTTCGACTTCGAGGGTGATG 186972 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || || | ||| || |||||||| ||||| Sbjct 186973 GTTTTACCCGTGAGGGTCTTCACAAATATTTGCAT 187007 >seq324 Length=2934362 Score = 122 bits (134), Expect = 7e-23 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || || |||| ||| || |||||||| || || ||||| || || | | |||||| Sbjct 1892408 CGGAGTACCAGATGCAGAGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCG 1892349 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || ||||| ||||| |||||| | |||||||| ||||||||||| || || ||||| ||| Sbjct 1892348 TCTTCGAGCTGTTTCCCAGCAAAGATCAATCTCTGCTGATCCGGGGGGATCCCCTCCTTG 1892289 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 || || | || ||||||| | || | ||||| || || || || | || || Sbjct 1892288 TCCTGGATCTTCGCTTTGACATTCTCGATGGTGTCGGAGGCCTCGACCTCCAATGTGATG 1892229 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| || || || || ||||| |||||||| Sbjct 1892228 GTCTTGCCGGTCAAAGTCTTCACAAAAATCTGCAT 1892194 Score = 113 bits (124), Expect = 3e-20 Identities = 156/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || ||||||| || || ||||| || || || ||||| || || | | ||| || Sbjct 1892864 CGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGATAAGGTACGCCCG 1892805 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || || ||||| || || | |||| |||||| || || || || || ||||||||| Sbjct 1892804 TCCTCAAGCTGTTTCCCCGCGAAGATCAGTCTTTGTTGGTCGGGTGGGATGCCCTCTTTG 1892745 Query 29692 TCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||||| |||||| | ||| || | || | || || || ||| || || | ||| || Sbjct 1892744 TCTTG-AATTTTGGCTTTCACGTTCTCGATGGTATCCGACGCTTCGACCTCCAAAGTAAT 1892686 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||||| ||||| ||||| || ||||| |||||||| Sbjct 1892685 AGTTTTACCAGTCAAGGTCTTGACAAAAATCTGCAT 1892650 Score = 113 bits (124), Expect = 3e-20 Identities = 149/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643 ||||||||||||||||| || ||||| ||||| | | |||||| || ||||||||| Sbjct 1893080 TGAAGCGTGGATTCTTTCTGGATGTTGTAATCGGACAAGGTGCGCCCGTCCTCGAGTTGT 1893021 Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703 ||||| || | || || |||||||| || || ||||| || |||||||| || ||| || Sbjct 1893020 TTGCCCGCGAAGATTAACCTTTGCTGGTCAGGTGGAATGCCTTCTTTGTCCTG-AATCTT 1892962 Query 29704 TG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGT 29762 | || || | || | ||||| || || || || | || ||||| || || || Sbjct 1892961 CGCCTTCACGTTCTCGATGGTGTCGGAGGCCTCGACCTCCAACGTGATAGTCTTCCCCGT 1892902 Query 29763 TAAGGTTTTAACAAATATCTGCAT 29786 ||||| || || || |||||||| Sbjct 1892901 CAAGGTCTTGACGAAGATCTGCAT 1892878 Score = 102 bits (112), Expect = 6e-17 Identities = 156/217 (72%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCG-CAATGGTGCGAGA 29630 || || ||||| ||||| || ||||| || || ||||||||||| | |||| ||||| Sbjct 1891724 CGAAGTACCAAGTGAAGGGTAGATTCCTTCTGGATGTTATAATCGGACAAT-GTGCGTCC 1891666 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || |||||||| ||||||||| | || | | ||||| || || || || || ||||| Sbjct 1891665 GTCCTCGAGTTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCGGGTGGGATCCCTTCTTT 1891606 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 || || ||| || | || || | || | |||||| || ||| ||||| || || | Sbjct 1891605 ATCCTG-AATCTTGGCCTTCACGTTCTCGATAGTGTCGGACGCTTCAACTTCGAGGGTGA 1891547 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | ||||| || || | || || || || |||||||| Sbjct 1891546 TGGTTTTCCCCGTCAGTGTCTTCACGAAAATCTGCAT 1891510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385152894506343