Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dinoponera_20quadriceps_20[refseq_20GCF_5F001313825.1_202015-10-13] 14,123 sequences; 259,665,865 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq324 127 2e-24 seq413 109 5e-19 seq408 105 6e-18 seq383 100 3e-16 seq3542 82.4 7e-11 >seq324 Length=2934362 Score = 127 bits (140), Expect = 2e-24 Identities = 153/208 (74%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 || || | ||| || || ||||| || || |||||| || ||| ||||||||| Sbjct 1891715 AAGTGAAGGGTAGATTCCTTCTGGATGTTATAATCGGACAATGTGCGTCCGTCCTCGAGT 1891656 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 |||||||| || | ||||| |||||||||||||| ||||| ||||| || || ||| Sbjct 1891655 TGCTTGCCAGCAAAGATGAGACGCTGCTGGTCGGGTGGGATCCCTTCTTTATCCTGAATC 1891596 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||| | | ||| | ||||||| | || || |||| ||||| |||||| || Sbjct 1891595 TTGGCCTTCACGTTCTCGATAGTGTCGGACGCTTCAACTTCGAGGGTGATGGTTTTCCCC 1891536 Query 133635 GTCAGAGTTTTTACGAAAATCTGCATGG 133662 ||||| || || |||||||||||||||| Sbjct 1891535 GTCAGTGTCTTCACGAAAATCTGCATGG 1891508 Score = 114 bits (126), Expect = 1e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 ||||| | || ||||||||||| || ||||| ||| || ||| ||| || ||| Sbjct 1892627 AAATGCAAAGTAGACTCTTTCTGAATGTTGTAGTCGGACAGGGTGCGTCCGTCTTCCAGC 1892568 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 || || |||||| | || || | ||||||||||| || ||||||||||| || |||| Sbjct 1892567 TGTTTCCCCGCGAAGATCAGTCTTTGCTGGTCGGGTGGAATGCCTTCCTTATCTTGGATC 1892508 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||| | | |||| ||||| | | ||| || || | |||| ||||||||| Sbjct 1892507 TTGGCCTTCACATTTTCAATAGTGTCAGAAGCCTCAACCTCCAAAGTGATGGTTTTGCCC 1892448 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 |||| ||| || || ||||||||||| Sbjct 1892447 GTCAAAGTCTTCACAAAAATCTGCAT 1892422 Score = 107 bits (118), Expect = 2e-18 Identities = 143/199 (72%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||| || |||||||| || ||||||||| || ||| |||||||||||| ||||| Sbjct 1892163 GGTAGATTCTTTCTGGATGTTGTAATCGGACAATGTGCGTCCGTCCTCGAGCTGTTTGCC 1892104 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | || |||||||| || || |||||||| ||||| |||||| ||| Sbjct 1892103 TGCGAAGATCAACCTTTGCTGGTCAGGTGGAATGCCTTCTTTGTCCTGGATCTTCGCCTT 1892044 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | ||| | ||||| | | |||||| || | |||| || || || |||| || Sbjct 1892043 CACGTTCTCGATGGTGTCCGAAGCCTCCACCTCCAAAGTGATCGTCTTTCCTGTCAAGGT 1891984 Query 133643 TTTTACGAAAATCTGCATG 133661 || |||||||| |||||| Sbjct 1891983 CTTGACGAAAATTTGCATG 1891965 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 ||||| || ||||| || ||||| || || ||| ||| |||||||| || || Sbjct 1892390 GTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCGTCTTCGAGCTGTTTCCCA 1892331 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 || | || | | |||||| || || ||||| || |||||||| |||||| ||| Sbjct 1892330 GCAAAGATCAATCTCTGCTGATCCGGGGGGATCCCCTCCTTGTCCTGGATCTTCGCTTTG 1892271 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | ||| | ||||||| || ||| || || | |||| ||| |||||||||| ||| Sbjct 1892270 ACATTCTCGATGGTGTCGGAGGCCTCGACCTCCAATGTGATGGTCTTGCCGGTCAAAGTC 1892211 Query 133644 TTTACGAAAATCTGCAT 133660 || || ||||||||||| Sbjct 1892210 TTCACAAAAATCTGCAT 1892194 >seq413 Length=1084034 Score = 109 bits (120), Expect = 5e-19 Identities = 126/170 (74%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 148814 GTTCACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTAC 148873 ||| ||||||||||| |||| |||||||||||| || |||||| | |||||| | Sbjct 768311 GTTAACGGCGATAGATGCTAAATTGCACACGGCGACTTCCTCCGGGCTGGAGTACTCGAT 768370 Query 148874 GATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCT 148933 | ||||| ||||| |||||||||||||||| ||||| || | ||||| |||| Sbjct 768371 AACCTCGGTGCACAAATTGCTGCATTTGATCGTGCCCAGGTGTTGATGATTCGATTTGCG 768430 Query 148934 GTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCG 148983 ||||| || ||||| ||||| ||||| || || |||||||||| Sbjct 768431 ATTGCAGTGATCTTTGTAGAGCATATACGGCGTCCCGGTCTCCACCTGCG 768480 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 148287 ACGCGCCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATC 148346 ||||| | || || | ||||| || |||| || | ||||||||||| ||||| ||| Sbjct 767604 ACGCGTCTCACGTAGATATTGCTGGTGTACGGCTCGATGGACTCGTTGTTTCCCAAGATC 767663 Query 148347 TGCGCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTT 148406 ||||| |||| || || ||||| ||| | || || || || | || ||| | || Sbjct 767664 TGCGCCGTCGACGCAGTCGGCATAGGCGCAATCAAGAGGGAATTTCTCACCCCGTGCTTC 767723 Query 148407 TTTATTTTGCGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATG 148466 ||||| ||||| | |||||||||| | || ||| | |||||||||||| Sbjct 767724 GCGATTTTCGCCTTCAATTCATCCCAGTCCCACAAATCCGTCGGCTTAACGTTCCACATG 767783 Query 148467 TCGTACTGCAGAAT 148480 ||||| |||| ||| Sbjct 767784 TCGTATTGCAAAAT 767797 >seq408 Length=1748099 Score = 105 bits (116), Expect = 6e-18 Identities = 118/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564 |||||| | ||||||||| || | || || |||||||| || || || || |||||||| Sbjct 1304054 GTCCTCCAACTGCTTGCCAGCAAAGATTAGTCGCTGCTGATCAGGCGGAATTCCTTCCTT 1304113 Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624 ||| |||||| ||| | | || | ||||||| | |||||| || | ||||| Sbjct 1304114 GTCCTGGATCTTAGCCTTTACATTTTCGATTGTGTCGGATGCCTCCACCTCAAGGGTGAT 1304173 Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCATGG 133662 ||||| || || || ||||| |||||||||||||||| Sbjct 1304174 CGTTTTACCCGTGAGGGTTTTCACGAAAATCTGCATGG 1304211 >seq383 Length=1361239 Score = 100 bits (110), Expect = 3e-16 Identities = 183/266 (69%), Gaps = 4/266 (2%) Strand=Plus/Minus Query 20263 GTACGGGTAATCAATCTCCTGCTCCACGCCGCCCATGTTCATGATCTGCTCGTAGGCCGT 20322 |||||||||||| |||| |||| | |||||||| ||| |||| | ||| || | Sbjct 591827 GTACGGGTAATCCGACTCCAGCTCGAGGCCGCCCAGCTTCTCGATCGCCCTGTAAGCGTT 591768 Query 20323 GTGGATGAGCCCGCCGTTGCAACCCATGTCCACCGTGTCGCAGTCCACCAGCTGTTGCTC 20382 || | ||||||||||| ||| ||||| |||||| |||||||||| ||||| Sbjct 591767 GTCCGGCAAACCGCCGTTGCAGCCCTCGTCCAGGTCGTCGCAATCCACCAGCTCCTGCTC 591708 Query 20383 GCTCAAATCGAC--CAGACGGTCGTACTTGATGGCGTACTGGCTCTCGAGCGCGCCCAGG 20440 ||| |||| ||| || || |||||||||||| |||| || | |||| Sbjct 591707 CGACAA--CGACAGCAGCTGGCTGTGCTTGATGGCGTATTGGCCTTCAACGTTGCCCGTC 591650 Query 20441 CCCGCAAACGCCCAGCACGCGCCGCACATGCGCTGGTCCTTGACCGAGGTGACTTTATTG 20500 ||| || |||||||||| ||||||| || ||| | ||| |||| || || Sbjct 591649 ACCGAGAAAGCCCAGCACGAGCCGCACGCGCCCTGATTCTTCACCGGCGTAACGACGCCT 591590 Query 20501 TAGTTGCGCCAGTCAAAGCTGGCCGG 20526 | | ||||||||| |||||||| || Sbjct 591589 TTCTCGCGCCAGTCGAAGCTGGCTGG 591564 >seq3542 Length=209091 Score = 82.4 bits (90), Expect = 7e-11 Identities = 146/208 (70%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGG-ACGAGTCCTCGAG 133513 ||||| | || ||||| ||||| || |||||||| | || || | || || || Sbjct 186802 AAATGCAGTGTTGACTCCTTCTGAATGTTGTAATCTGAAAGGGTTCTACCA-TCTTCTAG 186860 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||||||| ||| |||| || |||||||| || ||||| || || || || || ||| Sbjct 186861 CTGCTTGCCGGCGAAAATCAGACGCTGCTGATCCGGAGGAATTCCCTCTTTATCCTGGAT 186920 Query 133574 CTTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 ||| || || | | || | ||||||| | || || |||| ||||| |||||| | Sbjct 186921 -TTTGGCTTTCACATTTTCTATTGTGTCGGAAGCTTCGACTTCGAGGGTGATGGTTTTAC 186979 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660 | || || || || || || || ||||| Sbjct 186980 CCGTGAGGGTCTTCACAAATATTTGCAT 187007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483335458100520