Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dinoponera_20quadriceps_20[refseq_20GCF_5F001313825.1_202015-10-13] 14,123 sequences; 259,665,865 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq324 98.7 7e-16 seq3542 95.1 8e-15 seq408 93.3 3e-14 >seq324 Length=2934362 Score = 98.7 bits (108), Expect = 7e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | ||||| | |||| ||| ||||| ||| ||||| |||||||| || || Sbjct 1891964 CCACCACGTAAACGGAGAACCAGATGCAGAGTCGACTCCTTTTGGATGTTGTAGTCCGAC 1891905 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || || | ||||| || ||||| ||||| | |||||||||| | || Sbjct 1891904 AGGGTGCGGCCATCTTCGAGCTGTTTCCCAGCAAAGATCAATCTCTGCTGATCTGGAGGG 1891845 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | || || ||||| || || || || |||| || | ||| ||| | || || Sbjct 1891844 ATCCCCTCCTTGTCTTGGATCTT-TGCTTTGACATTCTCGATGGTATCGGAGGCCTCGAC 1891786 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| || || || || || || || |||||||||||||| Sbjct 1891785 CTCCAATGTGATGGTCTTGCCGGTCAAAGTCTTCACAAAGATCTGCAT 1891738 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 |||||||| | || | || | || || ||| ||||| || |||||||||||||| Sbjct 1893104 CCACCTCTAAGGCGAAGTACAAGGTGAAGCGTGGATTCTTTCTGGATGTTGTAATCGGAC 1893045 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | ||||| |||| || | |||||| || || || || || | ||||| || | || Sbjct 1893044 AAGGTGCGCCCGTCCTCGAGTTGTTTGCCCGCGAAGATTAACCTTTGCTGGTCAGGTGGA 1892985 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||||||||| ||| ||| |||| | | || | ||||||| | || || Sbjct 1892984 ATGCCTTCTTTGTCCTGAATCTTCGCCTTCA-CGTTCTCGATGGTGTCGGAGGCCTCGAC 1892926 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | |||||| || || || || || || || || |||||||||||| Sbjct 1892925 CTCCAACGTGATAGTCTTCCCCGTCAAGGTCTTGACGAAGATCTGCATA 1892877 Score = 87.8 bits (96), Expect = 1e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618 ||||| || |||||||||||||| | ||||||| |||| || | ||||| || || || Sbjct 1892156 TCTTTCTGGATGTTGTAATCGGACAATGTGCGTCCGTCCTCGAGCTGTTTGCCTGCGAAG 1892097 Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATA 33678 ||||| | ||||| || | || | ||||||||||| || ||| ||| || | Sbjct 1892096 ATCAACCTTTGCTGGTCAGGTGGAATGCCTTCTTTGTCCTGGATCTTCGCCTTC-ACGTT 1892038 Query 33679 GTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTAC 33737 || | |||||| | ||||| || | |||||||| || ||||| || || || || Sbjct 1892037 CTCGATGGTGTCCGAAGCCTCCACCTCCAAAGTGATCGTCTTTCCTGTCAAGGTCTTGAC 1891978 Query 33738 AAAGATCTGCAT 33749 || || ||||| Sbjct 1891977 GAAAATTTGCAT 1891966 >seq3542 Length=209091 Score = 95.1 bits (104), Expect = 8e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| |||| | ||| | |||||||| || ||| || || || |||||||| ||||| Sbjct 187236 ACCTCCTCGAAGACGCAGAACCAAATGAAGTGTGGATTCCTTCTGGATGTTGTAGTCGGA 187295 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || | | || ||||| ||||| ||||| ||||||| |||||||||||| | || Sbjct 187296 AAGAGTTCTGCCATCTTCCAACTGTTTGCCGGCGAAAATCAGACGCTGCTGATCCGGAGG 187355 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | || |||||||| || || | || |||| || | ||||| | ||| | Sbjct 187356 AATTCCCTCTTTGTCTTGGATCTT-GGCTTTTACATTTTCTATCGTGTCAGAAGCTTCGA 187414 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | || || || || ||||| | ||||| ||||| |||||||| Sbjct 187415 CTTCGAGAGTAATAGTCTTGCCTGTGAGAGTTTTGACAAATATCTGCAT 187463 Score = 87.8 bits (96), Expect = 1e-12 Identities = 151/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 33535 CGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCG 33594 || || || ||||| || || ||| || || ||||||||||| || || || | | Sbjct 186793 CGCAAGACTAAATGCAGTGTTGACTCCTTCTGAATGTTGTAATCTGAAAGGGTTCTACCA 186852 Query 33595 TCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTG 33654 || || | || || ||||| ||||||| |||||||||||| | || | || ||||| Sbjct 186853 TCTTCTAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGATCCGGAGGAATTCCCTCTTTA 186912 Query 33655 TCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGAT 33713 || ||||| |||| |||| || | |||||| | ||| || || | ||||| Sbjct 186913 TCCTGGATTTTGGCTTTC-ACATTTTCTATTGTGTCGGAAGCTTCGACTTCGAGGGTGAT 186971 Query 33714 CGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 |||||||| || | || || ||||| || |||||| Sbjct 186972 GGTTTTACCCGTGAGGGTCTTCACAAATATTTGCATA 187008 Score = 86.0 bits (94), Expect = 4e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 |||||||| || ||| || || || |||||||| ||||| || || | | || ||| Sbjct 187027 ACCAAATGAAGTGTGGATTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCTGCCATCTTCC 187086 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 || ||||| || || ||||||| |||||||||||| | || | || |||||||| Sbjct 187087 AACTGTTTGCCAGCGAAAATCAGACGCTGCTGATCCGGAGGAATTCCCTCTTTGTCTTGG 187146 Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 || || | | |||| || | ||||| | ||| || || | ||||| || || Sbjct 187147 ATCTT-GGCCTTTACATTTTCTATTGTGTCAGAAGCTTCGACTTCGAGGGTGATGGTCTT 187205 Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 ||||| | || |||||||| || |||||| Sbjct 187206 GCCTGTGAGAGTCTTTACAAATATTTGCATA 187236 Score = 86.0 bits (94), Expect = 4e-12 Identities = 159/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || |||| | ||| | |||| ||| || ||| || || || |||||||| ||||| Sbjct 187465 CCTCCTCGAAGACGCAGAACCAGATGAAGCGTGGATTCCTTCTGGATGTTGTAGTCGGAA 187524 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || | | || ||||| ||||| ||||| ||||||| |||||||||||| | || Sbjct 187525 AGAGTTCTGCCATCTTCCAACTGTTTGCCGGCGAAAATCAGACGCTGCTGATCCGGAGGA 187584 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | || |||||||| || || | || |||| || | || || | ||| || Sbjct 187585 ATTCCCTCTTTGTCTTGGATCTT-GGCTTTTACATTTTCTATTGTATCAGAAGCTTCGAC 187643 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGT 33752 || | ||||| || || ||||| | || || |||||||| ||||| || Sbjct 187644 CTCGAGAGTGATGGTCTTGCCTGTAAGAGTCTTCACAAAGATTTGCATGGT 187694 >seq408 Length=1748099 Score = 93.3 bits (102), Expect = 3e-14 Identities = 141/197 (72%), Gaps = 3/197 (2%) Strand=Plus/Plus Query 33562 TTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATC 33621 ||||| || || || ||||| | || ||| |||| ||||| || || || ||||| || Sbjct 1304022 TTTTGAATATTATAGTCGGACAAAGTACGTCCGTCCTCCAACTGCTTGCCAGCAAAGATT 1304081 Query 33622 AAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC 33681 | ||||||||||| |||| | ||||| ||||| || || | | |||| || Sbjct 1304082 AGTCGCTGCTGATCAGGCGGAATTCCTTCCTTGTCCTGGATCTT-AGCCTTTACATTTTC 1304140 Query 33682 -ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAA 33740 | |||||| || ||||| |||| |||||||||||||| || | ||||| || || Sbjct 1304141 GATTGTGTCGGATGCCTCCACCTCAAGGGTGATCGTTTTACCCGTGAGGGTTTTCACGAA 1304200 Query 33741 GATCTGCATAGTTGGTG 33757 |||||||| | ||||| Sbjct 1304201 AATCTGCAT-GGTGGTG 1304216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328647422132160