Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dinoponera_20quadriceps_20[refseq_20GCF_5F001313825.1_202015-10-13] 14,123 sequences; 259,665,865 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq3542 143 6e-29 seq324 136 9e-27 seq408 102 2e-16 >seq3542 Length=209091 Score = 143 bits (158), Expect = 6e-29 Identities = 163/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||||||| |||||| |||||||| || || || ||| | ||||| ||| ||||||| Sbjct 187460 CAGATATTTGTCAAAACTCTCACAGGCAAGACTATTACTCTCGAAGTCGAAGCTTCTGAC 187401 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | ||| ||||| ||||| ||||| ||||| |||||| ||||| || Sbjct 187400 ACGATAGAAAATGTAAAAGCCAAGATCCAAGACAAAGAGGGAATTCCTCCGGATCAGCAG 187341 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || || |||||||| || |||||||||||||| || ||| | |||| |||||| || Sbjct 187340 CGTCTGATTTTCGCCGGCAAACAGTTGGAAGATGGCAGAACTCTTTCCGACTACAACATC 187281 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391 ||||| || || || ||||| | ||| || | |||||| Sbjct 187280 CAGAAGGAATCCACACTTCATTTGGTTCTGCGTCTTCGA 187242 Score = 134 bits (148), Expect = 3e-26 Identities = 161/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || |||||| || || |||||||| || || ||||| | ||||| ||| ||||||| Sbjct 187232 CAAATATTTGTAAAGACTCTCACAGGCAAGACCATCACCCTCGAAGTCGAAGCTTCTGAC 187173 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 ||| | ||| |||||| ||||| ||||| ||||| |||||| ||||| || Sbjct 187172 ACAATAGAAAATGTAAAGGCCAAGATCCAAGACAAAGAGGGAATTCCTCCGGATCAGCAG 187113 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || || ||||| || || |||||||||||||| || ||| | |||| |||||| || Sbjct 187112 CGTCTGATTTTCGCTGGCAAACAGTTGGAAGATGGCAGAACTCTTTCCGACTACAACATC 187053 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391 ||||| || || || ||||| | ||| || | |||||| Sbjct 187052 CAGAAGGAATCCACACTTCATTTGGTTCTGCGCCTTCGA 187014 Score = 125 bits (138), Expect = 2e-23 Identities = 152/207 (73%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || ||||| || || |||||| | || || ||| |||||| ||| | ||| Sbjct 187676 AAGACTCTTACAGGCAAGACCATCACTCTCGAGGTCGAAGCTTCTGATACAATAGAAAAT 187617 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 ||||| ||||| ||||| ||||| |||||| ||||| || | || || ||| Sbjct 187616 GTAAAAGCCAAGATCCAAGACAAAGAGGGAATTCCTCCGGATCAGCAGCGTCTGATTTTC 187557 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| || |||||||||||||| || ||| | |||| |||||| ||||||| || || Sbjct 187556 GCCGGCAAACAGTTGGAAGATGGCAGAACTCTTTCCGACTACAACATCCAGAAGGAATCC 187497 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCGA 206391 || ||||| || ||| || | |||||| Sbjct 187496 ACGCTTCATCTGGTTCTGCGTCTTCGA 187470 >seq324 Length=2934362 Score = 136 bits (150), Expect = 9e-27 Identities = 149/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 |||||||| |||||||||||||| ||||| ||| ||||| |||| || ||| Sbjct 1891990 ACAGGAAAGACGATCACTTTGGAGGTGGAGGCTTCGGACACCATCGAGAACGTGAAGGCG 1892049 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| || || |||||||| ||| || ||| ||||| | |||||||| || || Sbjct 1892050 AAGATCCAGGACAAAGAAGGCATTCCACCTGACCAGCAAAGGTTGATCTTCGCAGGCAAA 1892109 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 ||| | || || ||| | || ||| ||||||||||| |||||||||| ||||| |||||| Sbjct 1892110 CAGCTCGAGGACGGACGCACATTGTCCGATTACAACATCCAGAAAGAATCTACCCTTCAC 1892169 Query 206374 CTTGTTTTGAGACTTCGA 206391 || || | |||||||| Sbjct 1892170 CTGGTACTTCGACTTCGA 1892187 Score = 132 bits (146), Expect = 1e-25 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || || | || || ||||| ||||||||||| || || ||||||| Sbjct 1892425 CAGATTTTTGTGAAGACTTTGACGGGCAAAACCATCACTTTGGAGGTTGAGGCTTCTGAC 1892484 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | ||| || ||| ||||| ||||| || ||||| ||| || ||| ||| Sbjct 1892485 ACTATTGAAAATGTGAAGGCCAAGATCCAAGATAAGGAAGGCATTCCACCCGACCAGCAA 1892544 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||||| |||||||| || || ||| ||||||| ||| | || || |||| |||||| | Sbjct 1892545 AGACTGATCTTCGCGGGGAAACAGCTGGAAGACGGACGCACCCTGTCCGACTACAACATT 1892604 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||||||||||||| | || | |||||| |||| || Sbjct 1892605 CAGAAAGAGTCTACTTTGCATTTAGTTTTGCGACTCCG 1892642 Score = 102 bits (112), Expect = 2e-16 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || | || || || || ||||| ||||| || || || ||| Sbjct 1892881 CAGATCTTCGTCAAGACCTTGACGGGGAAGACTATCACGTTGGAGGTCGAGGCCTCCGAC 1892940 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| |||||||| || |||||||| ||| || ||| ||| Sbjct 1892941 ACCATCGAGAACGTGAAGGCGAAGATTCAGGACAAAGAAGGCATTCCACCTGACCAGCAA 1893000 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | |||||||| || || || | || || || | || ||| ||||||||||| || Sbjct 1893001 AGGTTAATCTTCGCGGGCAAACAACTCGAGGACGGGCGCACCTTGTCCGATTACAACATC 1893060 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 |||||||| || || ||||||||||| Sbjct 1893061 CAGAAAGAATCCACGCTTCACCTTGT 1893086 >seq408 Length=1748099 Score = 102 bits (112), Expect = 2e-16 Identities = 121/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| ||||| || ||||||||||| | || ||||| || |||||| ||||| Sbjct 1304194 AAAACCCTCACGGGTAAAACGATCACCCTTGAGGTGGAGGCATCCGACACAATCGAAAAT 1304135 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 |||||| ||||| || || || ||||||||| ||| || || |||| ||||| Sbjct 1304134 GTAAAGGCTAAGATCCAGGACAAGGAAGGAATTCCGCCTGATCAGCAGCGACTAATCTTT 1304075 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAA 206348 || || ||||||||||| || ||| | |||||| |||| || || Sbjct 1304074 GCTGGCAAGCAGTTGGAGGACGGACGTACTTTGTCCGACTATAA 1304031 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181606948418283