Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dinoponera_20quadriceps_20[refseq_20GCF_5F001313825.1_202015-10-13] 14,123 sequences; 259,665,865 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq3542 95.1 1e-14 seq324 95.1 1e-14 seq408 84.2 2e-11 seq413 82.4 7e-11 >seq3542 Length=209091 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 ||||| || ||||| | ||||||| || ||||||||||| || | ||| | | Sbjct 186793 CGCAAGACTAAATGCAGTGTTGACTCCTTCTGAATGTTGTAATCTGAAAGGGTTCTACCA 186852 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| ||||| || |||| | || |||||||| ||||| ||||| || || |||||| Sbjct 186853 TCTTCTAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGATCCGGAGGAATTCCCTCTTTA 186912 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || ||||| ||||| | ||| | || |||| | || ||||||| || | Sbjct 186913 TCCTGGATTTTGGCTTTCACATTTTCTATTGTGTCGGAAGCTTCGACTTCGAGGGTGATG 186972 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 |||||||| || || || || | || || ||||| Sbjct 186973 GTTTTACCCGTGAGGGTCTTCACAAATATTTGCAT 187007 >seq324 Length=2934362 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 |||||||| ||||| | | |||||||| ||||||||||||||| || ||| || Sbjct 1892636 CGCAAAACTAAATGCAAAGTAGACTCTTTCTGAATGTTGTAGTCGGACAGGGTGCGTCCG 1892577 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| |||||||| || | |||| || | || || || || || |||||||| ||| Sbjct 1892576 TCTTCCAGCTGTTTCCCCGCGAAGATCAGTCTTTGCTGGTCGGGTGGAATGCCTTCCTTA 1892517 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || || || |||| | ||| | ||| || | | ||| || || | || | Sbjct 1892516 TCTTGGATCTTGGCCTTCACATTTTCAATAGTGTCAGAAGCCTCAACCTCCAAAGTGATG 1892457 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| || |||| ||| || | ||||||||||| Sbjct 1892456 GTTTTGCCCGTCAAAGTCTTCACAAAAATCTGCAT 1892422 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 ||||| || | | | || || || || ||||| || ||| || || || || ||| Sbjct 1891718 ACCAAGTGAAGGGTAGATTCCTTCTGGATGTTATAATCGGACAATGTGCGTCCGTCCTCG 1891659 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 || || || || | | |||| |||||||| || || || || || ||||||||||| | Sbjct 1891658 AGTTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCGGGTGGGATCCCTTCTTTATCCTGA 1891599 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 || || |||| | || | ||| |||| || || ||||||| || | ||||| Sbjct 1891598 ATCTTGGCCTTCACGTTCTCGATAGTGTCGGACGCTTCAACTTCGAGGGTGATGGTTTTC 1891539 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCATG 132124 || ||||| || || | ||||||||||||| Sbjct 1891538 CCCGTCAGTGTCTTCACGAAAATCTGCATG 1891509 Score = 91.5 bits (100), Expect = 1e-13 Identities = 154/223 (69%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||| || || | ||||| ||| | | ||||| ||||| ||||||||||| || ||| Sbjct 1891959 ACGTAAACGGAGAACCAGATGCAGAGTCGACTCCTTTTGGATGTTGTAGTCCGACAGGGT 1891900 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 || ||||||||||||||| || | | |||| | | ||| ||||||||||| || || Sbjct 1891899 GCGGCCATCTTCGAGCTGTTTCCCAGCAAAGATCAATCTCTGCTGATCTGGAGGGATCCC 1891840 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 || || || || ||| ||| | | || | ||||||| | ||| || || | Sbjct 1891839 CTCCTTGTCTTGGATCTTTGCTTTGACATTCTCGATGGTATCGGAGGCCTCGACCTCCAA 1891780 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124 || | || || || |||| ||| || | || ||||||||| Sbjct 1891779 TGTGATGGTCTTGCCGGTCAAAGTCTTCACAAAGATCTGCATG 1891737 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || |||||||||||| | ||||||| || || |||||||| || | Sbjct 1892843 GACTCCTTCTGGATGTTGTAGTCGGATAAGGTACGCCCGTCCTCAAGCTGTTTCCCCGCG 1892784 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || | ||||| || || || ||||| ||||| || |||||| ||||| Sbjct 1892783 AAGATCAGTCTTTGTTGGTCGGGTGGGATGCCCTCTTTGTCTTGAATTTTGGCTTTCACG 1892724 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | ||||| | || || || || | || | ||||||||||||| || || Sbjct 1892723 TTCTCGATGGTATCCGACGCTTCGACCTCCAAAGTAATAGTTTTACCAGTCAAGGTCTTG 1892664 Query 132110 ATGAAAATCTGCAT 132123 | ||||||||||| Sbjct 1892663 ACAAAAATCTGCAT 1892650 >seq408 Length=1748099 Score = 84.2 bits (92), Expect = 2e-11 Identities = 132/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 131936 TTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAATAGATT 131995 |||||||| || |||||| || ||||| || || | ||| || || | | ||||| Sbjct 1304022 TTTTGAATATTATAGTCGGACAAAGTACGTCCGTCCTCCAACTGCTTGCCAGCAAAGATT 1304081 Query 131996 AGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAACTGTTCC 132055 || ||||| ||||| || || || ||||| || || || || || | | ||| Sbjct 1304082 AGTCGCTGCTGATCAGGCGGAATTCCTTCCTTGTCCTGGATCTTAGCCTTTACATTTTCG 1304141 Query 132056 ACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAA 132115 | || |||| | |||||| || | || | ||||||||| || || ||||| | |||| Sbjct 1304142 ATTGTGTCGGATGCCTCCACCTCAAGGGTGATCGTTTTACCCGTGAGGGTTTTCACGAAA 1304201 Query 132116 ATCTGCATG 132124 ||||||||| Sbjct 1304202 ATCTGCATG 1304210 >seq413 Length=1084034 Score = 82.4 bits (90), Expect = 7e-11 Identities = 120/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 147453 GTTCACGGCGATAGACGCCAGATTGCAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCAC 147512 ||| ||||||||||| || | |||||| ||||| || || | | | ||||| | Sbjct 768311 GTTAACGGCGATAGATGCTAAATTGCACACGGCGACTTCCTCCGGGCTGGAGTACTCGAT 768370 Query 147513 GATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCG 147572 | |||| ||||| ||||||||||| || |||| | ||| ||||| ||| || Sbjct 768371 AACCTCGGTGCACAAATTGCTGCATTTGATCGTGCCCAGGTGTTGATGATTCGATTTGCG 768430 Query 147573 ATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCG 147622 |||||| |||||| ||||||| ||||| |||||||| || |||| Sbjct 768431 ATTGCAGTGATCTTTGTAGAGCATATACGGCGTCCCGGTCTCCACCTGCG 768480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476527060250280