Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dinoponera_20quadriceps_20[refseq_20GCF_5F001313825.1_202015-10-13] 14,123 sequences; 259,665,865 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq1634 105 1e-16 seq2673 87.8 3e-11 seq13756 86.0 9e-11 >seq1634 Length=549241 Score = 105 bits (116), Expect = 1e-16 Identities = 161/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 || ||||||||||| |||||||||||||| |||| | ||||| |||| | Sbjct 438472 ATTTACAAGGTGCTGAAGCAGGTGCACCCGGATACCG------GAATCTCCAGCAAGGCG 438419 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||| ||||||||| || || |||||| || |||| | |||| ||||||| Sbjct 438418 ATGAGCATCATGAACAGCTTCGTGAACGACGTGTTCGAGAGAATCGCTGCCGAGGCGTCA 438359 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 || ||||||| || |||||| | |||||| | || ||||| ||||| || ||| Sbjct 438358 CGACTGGCGCACTACAACAAAAGATCGACGATCACTTCCCGTGAGATACAGACGGCGGTG 438299 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 | || | ||| ||||||| |||||| |||||| ||| ||| ||||| Sbjct 438298 AGGCTACTGCTGCCCGGCGAATTGGCCAAGCACGCAGTCAGCGAAGGCAC 438249 Score = 105 bits (116), Expect = 1e-16 Identities = 165/233 (71%), Gaps = 10/233 (4%) Strand=Plus/Plus Query 724910 TATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTC 724969 ||||||||| ||| | |||||||||||||| |||| | ||| |||| ||| | Sbjct 440920 TATCTACAAAGTGTTGAAGCAGGTGCACCCGGACACCGGT-----ATC-TCCAGCAAAGC 440973 Query 724970 CATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGG 725029 |||| ||||||||| || |||||||| | |||| ||||| | ||||||| | Sbjct 440974 CATGAGCATCATGAACAGTTTCGTCAACGATGTTTTCGAACGCATTGCGGCCGAGGC--G 441031 Query 725030 TCGCC--TGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCC 725087 |||| |||| | | ||| || ||| ||| ||| | | || ||||||||||| ||| Sbjct 441032 TCGCGATTGGCTCATTACAATAAACGCTCCACCATCACCTCCCGGGAGATCCAGACTGCC 441091 Query 725088 GTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 || | ||| || | | |||||| |||| | |||||| ||| ||| ||||| Sbjct 441092 GTCAGGCTGCTCCTACCGGGCGAATTGGCTAAGCACGCAGTCAGCGAAGGCAC 441144 >seq2673 Length=2501080 Score = 87.8 bits (96), Expect = 3e-11 Identities = 142/196 (72%), Gaps = 9/196 (5%) Strand=Plus/Plus Query 1600559 ACCTTGCCCAGGAGGGCCTCCATCATCTTGCCCATGGTCATGCGCGACGGGATGGCGTGC 1600618 ||||| ||| | | | ||| |||| | || |||||||| ||||| ||||| ||||| Sbjct 2417141 ACCTTCCCCTGTATGCACTCGATCAAGTGACCGATGGTCATACGCGAGGGGATAGCGTGG 2417200 Query 1600619 GGGTTGATCACAATGTCGGGCGTGGCACCGCCGCGAGGCGACCAGGGCATGTCCTCGGTG 1600678 |||||||| | |||||||||||| ||| ||| ||| || | ||||||||||| Sbjct 2417201 GGGTTGATGATTATGTCGGGCGTGAGACCCTCGC-AGGAGA--ACGGCATGTCCTC--CT 2417255 Query 1600679 GAGCGCAC-GCTGCCCAC-GGTGCCCTTTTGGCCGTGGCGCGACGACAGTTTGTCGCCCA 1600736 | | || | ||||| || ||||| || ||||||||||||| | |||||||| | Sbjct 2417256 GCCTGTACTGAATCCCACAAGTTCCCTTCTGCCCGTGGCGCGACGCAAACTTGTCGCCTA 2417315 Query 1600737 CCT-CGGGCTGGCGCA 1600751 || |||| | ||||| Sbjct 2417316 TCTGCGGGAT-GCGCA 2417330 >seq13756 Length=738 Score = 86.0 bits (94), Expect = 9e-11 Identities = 159/232 (69%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||||||||||| | || || || || ||| |||| | ||| || | ||| | Sbjct 172 ATCTACAAGGTGTTGAAACAAGTCCATCCCGACACCGGT-----ATC-TCTAGTAAGGCT 225 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||| || |||||| || || |||||||| |||| || |||| | | || || Sbjct 226 ATGAGCATAATGAACAGTTTCGTGAACGACATCTTCGAACGTATCGCCGCTGAAGCTTCC 285 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 || ||||| | || |||||| || |||||| | | || || || || |||||| Sbjct 286 CGTCTGGCACACTACAACAAACGTTCGACGATCACTAGCAGAGAAATTCAAACTGCCGTG 345 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || ||| | ||| ||| || |||||| ||||||||||||||| || |||| Sbjct 346 CGTCTGTTGTTGCCCGGTGAGTTGGCCAAGCACGCCGTCTCCGAAGGTACCA 397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7176449010691926