Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dinoponera_20quadriceps_20[refseq_20GCF_5F001313825.1_202015-10-13] 14,123 sequences; 259,665,865 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq3542 140 3e-28 seq324 138 1e-27 seq413 100 2e-16 >seq3542 Length=209091 Score = 140 bits (154), Expect = 3e-28 Identities = 172/235 (73%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCT 27079 |||||| || | ||||| || ||||| | || || || || ||||| ||||| || Sbjct 186780 GCCTCCACGAAGTCGCAAGACTAAATGCAGTGTTGACTCCTTCTGAATGTTGTAATCTGA 186839 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | | | | | ||||| ||||| || |||||| |||| |||||||| |||||||| || Sbjct 186840 AAGGGTTCTACCATCTTCTAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGATCCGGAGG 186899 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | ||||||||||| ||| ||| ||||| |||||| ||||| | ||||| || Sbjct 186900 AATTCCCTCTTTATCCTGGATTTTGGCTTTCACATTTTCTATTGTGTCGGAAGCTTCGAC 186959 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGCT 27254 ||| || || || | ||| ||||| || || |||||||| ||||||||| || || Sbjct 186960 TTCGAGGGTGATGGTTTTACCCGTGAGGGTCTTCACAAATATTTGCATACCTCCT 187014 Score = 138 bits (152), Expect = 1e-27 Identities = 170/230 (74%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 ||||||| || | |||| |||| ||| | ||| || || || || || ||||||||| Sbjct 187463 TGCCTCCTCGAAGACGCAGAACCAGATGAAGCGTGGATTCCTTCTGGATGTTGTAGTCGG 187522 Query 27079 TCAT-GTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGC 27137 | ||| || | ||||| | |||||| |||||| |||| |||||||| |||||||| Sbjct 187523 AAAGAGTTCTGC-CATCTTCCAACTGTTTGCCGGCGAAAATCAGACGCTGCTGATCCGGA 187581 Query 27138 GGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCA 27197 || | |||||||| || ||||||| ||| | |||||| || || | ||||| Sbjct 187582 GGAATTCCCTCTTTGTCTTGGATCTTGGCTTTTACATTTTCTATTGTATCAGAAGCTTCG 187641 Query 27198 ACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || ||||| || | ||||| || ||||| ||||||||||||||||| Sbjct 187642 ACCTCGAGAGTGATGGTCTTGCCTGTAAGAGTCTTCACAAAGATTTGCAT 187691 >seq324 Length=2934362 Score = 138 bits (152), Expect = 1e-27 Identities = 160/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 ||||| || ||||| || ||||| ||||| ||||| ||||||||| || | |||| || Sbjct 1892636 CGCAAAACTAAATGCAAAGTAGACTCTTTCTGAATGTTGTAGTCGGACAGGGTGCGTCCG 1892577 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 ||||| |||||||| || ||| | || || | || || || || || | || || ||| Sbjct 1892576 TCTTCCAGCTGTTTCCCCGCGAAGATCAGTCTTTGCTGGTCGGGTGGAATGCCTTCCTTA 1892517 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||||||| |||| |||| | |||||| | || ||||| || | ||| || Sbjct 1892516 TCTTGGATCTTGGCCTTCACATTTTCAATAGTGTCAGAAGCCTCAACCTCCAAAGTGATG 1892457 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 | ||||||||||| ||| |||||||| || |||||| Sbjct 1892456 GTTTTGCCCGTCAAAGTCTTCACAAAAATCTGCATA 1892421 Score = 118 bits (130), Expect = 9e-22 Identities = 184/262 (70%), Gaps = 7/262 (3%) Strand=Plus/Minus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 |||| || || | ||| | |||||| || | ||||| || || || || || || ||| Sbjct 1891738 TGCCGCCTCGAAGCCGAAGTACCAAGTGAAGGGTAGATTCCTTCTGGATGTTATAATCGG 1891679 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 || |||| |||| ||||| || || || || | ||||||||||| || || || | Sbjct 1891678 ACAATGTGCGTCCGTCCTCGAGTTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCGGGTG 1891619 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | || |||||||| |||||| |||| | | || | |||||| | ||||||| Sbjct 1891618 GGATCCCTTCTTTATCCTGAATCTTGGCCTTCACGTTCTCGATAGTGTCGGACGCTTCAA 1891559 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAG----CTGCT 27254 |||| || || || | ||| |||||||| || ||||| || || ||||| | |||| Sbjct 1891558 CTTCGAGGGTGATGGTTTTCCCCGTCAGTGTCTTCACGAAAATCTGCATGGTGCTCTGCA 1891499 Query 27255 AAAAATTTATTAAACCTTATTA 27276 | || |||| ||| |||||| Sbjct 1891498 ACAA---TATTTAACATTATTA 1891480 Score = 93.3 bits (102), Expect = 4e-14 Identities = 147/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 27038 TACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTC 27097 ||||| ||| | || || || || || || |||||||| || | |||| ||||||| Sbjct 1892403 TACCAGATGCAGAGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCGTCTTC 1892344 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 ||||||||| || || | || | | ||| |||||||| || | ||||| || || Sbjct 1892343 GAGCTGTTTCCCAGCAAAGATCAATCTCTGCTGATCCGGGGGGATCCCCTCCTTGTCCTG 1892284 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 |||||| ||| | | || | ||||| | ||| || || || | || || | || Sbjct 1892283 GATCTTCGCTTTGACATTCTCGATGGTGTCGGAGGCCTCGACCTCCAATGTGATGGTCTT 1892224 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 ||| |||| ||| |||||||| || |||||| Sbjct 1892223 GCCGGTCAAAGTCTTCACAAAAATCTGCATA 1892193 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 |||| || || || || | |||| ||| | || || || ||||| || |||||||| Sbjct 1891966 TGCCACCACGTAAACGGAGAACCAGATGCAGAGTCGACTCCTTTTGGATGTTGTAGTCCG 1891907 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 || | |||| | |||||||||||||| || || | || | | ||| ||||| || | Sbjct 1891906 ACAGGGTGCGGCCATCTTCGAGCTGTTTCCCAGCAAAGATCAATCTCTGCTGATCTGGAG 1891847 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | ||||| || || |||||| ||| | | || | || || | ||| || | Sbjct 1891846 GGATCCCCTCCTTGTCTTGGATCTTTGCTTTGACATTCTCGATGGTATCGGAGGCCTCGA 1891787 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || | || || | ||||| |||| ||| ||||||||||| ||||| Sbjct 1891786 CCTCCAATGTGATGGTCTTGCCGGTCAAAGTCTTCACAAAGATCTGCAT 1891738 >seq413 Length=1084034 Score = 100 bits (110), Expect = 2e-16 Identities = 137/191 (72%), Gaps = 3/191 (2%) Strand=Plus/Plus Query 130781 ACGCGTCTAACGTAAATGTTGCTCGTGAACGGTTCAAAGGATTCGTTGTTGCCGAATATT 130840 |||||||| ||||| || ||||| ||| |||| || | ||| |||||||| || || || Sbjct 767604 ACGCGTCTCACGTAGATATTGCTGGTGTACGGCTCGATGGACTCGTTGTTTCCCAAGATC 767663 Query 130841 TGTGCTGTAGTTGCGGTGGGCATGTATGCCACTAATAGAGAATTACGAAGACCGTGCGTC 130900 || || || | || || ||||| || | || || ||||| | | |||||| || Sbjct 767664 TGCGCCGTCGACGCAGTCGGCATAGGCGCAATCAAGAGGGAATTTCTCACCCCGTGCTTC 767723 Query 130901 GTGATTTTTCGCTTCAATTCATCCCAATCCCATAGAGAGGTAGGTTTGACATTGTTCCAC 130960 | |||||| ||||||||||||||| ||||| | | || || || || ||||||| Sbjct 767724 GCGATTTTCGCCTTCAATTCATCCCAGTCCCACAAATCCGTCGGCTTAAC---GTTCCAC 767780 Query 130961 ATATCAAATTG 130971 || || |||| Sbjct 767781 ATGTCGTATTG 767791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424861258564776