Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dinoponera_20quadriceps_20[refseq_20GCF_5F001313825.1_202015-10-13] 14,123 sequences; 259,665,865 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq3542 120 2e-22 seq324 111 1e-19 seq408 102 5e-17 >seq3542 Length=209091 Score = 120 bits (132), Expect = 2e-22 Identities = 169/232 (73%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 34477 TCGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCT 34536 ||||| || | ||| ||||| || ||||| || || |||||| |||||||| |||||| Sbjct 186778 TCGCCTCCACGAAGTCGCAAGACTAAATGCAGTGTTGACTCCTTCTGAATGTTGTAATCT 186837 Query 34537 GAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGC 34596 ||||| |||| | ||||| || || || ||||| || || | |||||| || ||||| Sbjct 186838 GAAAGGGTTCTACCATCTTCTAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGATCCGGA 186897 Query 34597 GGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTC-TTCGCTCT 34654 || | |||||| || || ||| ||| | ||| || | |||||||| ||| | Sbjct 186898 GGAATTCCCTCTTTATCCTGGAT-TTTGGCTTTCACATTTTCTATTGTGTCGGAAGCT-T 186955 Query 34655 CCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | ||||| | ||| || |||||||| || | || |||||||| || ||||| Sbjct 186956 CGACTTCGAGGGTGATGGTTTTACCCGTGAGGGTCTTCACAAATATTTGCAT 187007 >seq324 Length=2934362 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 ||||| | ||| || | |||| ||| |||||| ||||| || ||||| || || || Sbjct 1892420 CCGCCACGAAGTCGGAGTACCAGATGCAGAGTGGATTCCTTCTGGATGTTGTAGTCAGAC 1892361 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || ||||||| || ||||| || ||||| || || | ||| || ||||| || Sbjct 1892360 AGGGTGCGGCCGTCTTCGAGCTGTTTCCCAGCAAAGATCAATCTCTGCTGATCCGGGGGG 1892301 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | ||||||||||| |||| || | ||| || | || ||||| | ||| || Sbjct 1892300 ATCCCCTCCTTGTCCTGGATC-TTCGCTTTGACATTCTCGATGGTGTCGGAGGCCTCGAC 1892242 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| || || || || ||||| || || ||||||||||||||||| Sbjct 1892241 CTCCAATGTGATGGTCTTGCCGGTCAAAGTCTTCACAAAAATCTGCAT 1892194 Score = 111 bits (122), Expect = 1e-19 Identities = 165/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 ||||||| ||| || | ||||| ||||| ||| |||||| || ||||| || || || Sbjct 1892876 CCGCCTCGAAGTCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAT 1892817 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | || ||| |||| ||||| ||||| || || || || | | |||||||| || || Sbjct 1892816 AAGGTACGCCCGTCCTCAAGCTGTTTCCCCGCGAAGATCAGTCTTTGTTGGTCGGGTGGG 1892757 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAA-ATTGTGTCTT-CGCTCTCCA 34657 | ||||| |||||| ||| ||| | ||| ||| | || || || |||| || | Sbjct 1892756 ATGCCCTCTTTGTCT-TGAATTTTGGCTTTCACGTTCTCGATGGTATCCGACGCT-TCGA 1892699 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | |||| || || |||||||| || || || || |||||||||||||| Sbjct 1892698 CCTCCAAAGTAATAGTTTTACCAGTCAAGGTCTTGACAAAAATCTGCAT 1892650 Score = 104 bits (114), Expect = 1e-17 Identities = 151/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 |||| ||| ||||| ||||||||| ||||| || || || || || || | ||||| Sbjct 1891946 ACCAGATGCAGAGTCGACTCCTTTTGGATGTTGTAGTCCGACAGGGTGCGGCCATCTTCG 1891887 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 || ||||| || ||||| || || | ||| || || || || | |||||||||||| | Sbjct 1891886 AGCTGTTTCCCAGCAAAGATCAATCTCTGCTGATCTGGAGGGATCCCCTCCTTGTCTTGG 1891827 Query 34618 ATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 ||| |||| ||| || | || || || | ||| || |||| || || || || Sbjct 1891826 ATC-TTTGCTTTGACATTCTCGATGGTATCGGAGGCCTCGACCTCCAATGTGATGGTCTT 1891768 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 ||||| || || |||||||| ||||||||| Sbjct 1891767 GCCGGTCAAAGTCTTCACAAAGATCTGCATG 1891737 Score = 96.9 bits (106), Expect = 2e-15 Identities = 165/234 (71%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 |||||||| ||| || | ||||| || || || ||||| || ||||||||||| || Sbjct 1891737 GCCGCCTCGAAGCCGAAGTACCAAGTGAAGGGTAGATTCCTTCTGGATGTTATAATCGGA 1891678 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 | ||| || |||| || ||||| || || ||||| || | |||||| ||||| || || Sbjct 1891677 CAATGTGCGTCCGTCCTCGAGTTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCGGGTGG 1891618 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTC-TTCGCTCTCC 34656 | ||||| ||| ||| || | || ||| | || ||||| |||| || Sbjct 1891617 GA-TCCCTTCTTTATCCTGAATCTTGGCCTTCACGTTCTCGATAGTGTCGGACGCT-TCA 1891560 Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710 ||||| | ||| || ||||| || || | || ||||| |||||||||||| || Sbjct 1891559 ACTTCGAGGGTGATGGTTTTCCCCGTCAGTGTCTTCACGAAAATCTGCATGGTG 1891506 Score = 89.7 bits (98), Expect = 3e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 ||||| | || ||||| || ||||| | ||| ||| || |||||||| || || || Sbjct 1892648 CCGCCCCGGAGTCGCAAAACTAAATGCAAAGTAGACTCTTTCTGAATGTTGTAGTCGGAC 1892589 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || ||||||| || ||||| || || || || | | || ||||| || || Sbjct 1892588 AGGGTGCGTCCGTCTTCCAGCTGTTTCCCCGCGAAGATCAGTCTTTGCTGGTCGGGTGGA 1892529 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACT 34659 | || ||||| ||| |||||| || | | ||| ||||| ||| || Sbjct 1892528 ATGCCTTCCTTATCTTGGATCTTGGCCTTCACATTTTCAATAGTGTCAGAAGCCTCAACC 1892469 Query 34660 TCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| || || ||||| || || || || ||||||||||||||||| Sbjct 1892468 TCCAAAGTGATGGTTTTGCCCGTCAAAGTCTTCACAAAAATCTGCAT 1892422 >seq408 Length=1748099 Score = 102 bits (112), Expect = 5e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 34517 CCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATA 34576 |||||||||| ||||| || || | || || |||| || | || || || ||||| | Sbjct 1304020 CCTTTTGAATATTATAGTCGGACAAAGTACGTCCGTCCTCCAACTGCTTGCCAGCAAAGA 1304079 Query 34577 TTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA 34636 ||| ||||| || || ||||| | ||| |||||||| |||||| |||| | Sbjct 1304080 TTAGTCGCTGCTGATCAGGCGGAATTCCTTCCTTGTCCTGGATCTTAGCCTTTACATTTT 1304139 Query 34637 AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAA 34696 |||||||| |||||| || | ||| ||||||||||| || | |||||||| | Sbjct 1304140 CGATTGTGTCGGATGCCTCCACCTCAAGGGTGATCGTTTTACCCGTGAGGGTTTTCACGA 1304199 Query 34697 AAATCTGCATGTTG 34710 ||||||||||| || Sbjct 1304200 AAATCTGCATGGTG 1304213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314675427462659