Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dinoponera_20quadriceps_20[refseq_20GCF_5F001313825.1_202015-10-13] 14,123 sequences; 259,665,865 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq3542 179 3e-40 seq324 138 1e-27 seq777 93.3 4e-14 seq917 84.2 2e-11 >seq3542 Length=209091 Score = 179 bits (198), Expect = 3e-40 Identities = 190/248 (77%), Gaps = 3/248 (1%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||||||||| |||||||| || |||||| |||||||||| ||||| ||| | || Sbjct 187464 CATGCAGATATTTGTCAAAACTCTCACAGGCAAGACTATTACTCTCGAAGTCGAAGCTTC 187405 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| |||| || | || ||| || || ||||||||||| || || || || ||||| Sbjct 187404 TGACACGATAGAAAATGTAAAAGCCAAGATCCAAGACAAAGAGGGAATTCCTCCGGATCA 187345 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||||| | || | |||||||||||| |||||||| | || ||||||| ||||| Sbjct 187344 GCAGCGTCTGATTTTCGCCGGCAAACAGTTGGAAGATGGCAGAACTCTTTCCGACTACAA 187285 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCATAACAAACAC 27226 ||| || ||||| || || | ||||||||| ||||| | || || || || |||| | Sbjct 187284 CATCCAGAAGGAATCCACACTTCATTTGGTTCTGCGTCTTCGAGGAGGTAT-GCAAATA- 187227 Query 27227 TTTTGTAA 27234 ||||||| Sbjct 187226 -TTTGTAA 187220 Score = 145 bits (160), Expect = 7e-30 Identities = 185/254 (73%), Gaps = 2/254 (1%) Strand=Plus/Minus Query 26966 TAAATTTTTTAATTTATA--CGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCT 27023 ||||| |||| || | | | ||||||| || ||||| || ||||| || |||||| | Sbjct 187715 TAAATATTTTGTTTCAGAGCCACCATGCAAATCTTTGTGAAGACTCTTACAGGCAAGACC 187656 Query 27024 ATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGAC 27083 || ||||| || || ||| | || || | || || | || ||| || || |||||| Sbjct 187655 ATCACTCTCGAGGTCGAAGCTTCTGATACAATAGAAAATGTAAAAGCCAAGATCCAAGAC 187596 Query 27084 AAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGAC 27143 ||||| || || || || ||||| |||||| | || | |||||||||||| |||||||| Sbjct 187595 AAAGAGGGAATTCCTCCGGATCAGCAGCGTCTGATTTTCGCCGGCAAACAGTTGGAAGAT 187536 Query 27144 AGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGT 27203 | || ||||||| |||||||| || ||||| || || | ||| ||||| ||||| Sbjct 187535 GGCAGAACTCTTTCCGACTACAACATCCAGAAGGAATCCACGCTTCATCTGGTTCTGCGT 187476 Query 27204 TTGCGGGGTGGCAT 27217 | || || ||||| Sbjct 187475 CTTCGAGGAGGCAT 187462 Score = 140 bits (154), Expect = 3e-28 Identities = 160/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| ||||||||||| ||||| || |||||| | || || || ||||| ||| | || Sbjct 187235 ATGCAAATATTTGTAAAGACTCTCACAGGCAAGACCATCACCCTCGAAGTCGAAGCTTCT 187176 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || || || ||||||||||| || || || || ||||| Sbjct 187175 GACACAATAGAAAATGTAAAGGCCAAGATCCAAGACAAAGAGGGAATTCCTCCGGATCAG 187116 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||| |||||||| |||||||| | || ||||||| |||||| Sbjct 187115 CAGCGTCTGATTTTCGCTGGCAAACAGTTGGAAGATGGCAGAACTCTTTCCGACTACAAC 187056 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCG 27202 || || ||||| || || | ||||||||| |||| Sbjct 187055 ATCCAGAAGGAATCCACACTTCATTTGGTTCTGCG 187021 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| |||||||| || || || || || || | || || || ||||| ||| | ||| Sbjct 187007 ATGCAAATATTTGTGAAGACCCTCACGGGTAAAACCATCACCCTCGAAGTCGAAGCTTCC 186948 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || ||| ||||| || || ||||| || || || || ||||| Sbjct 186947 GACACAATAGAAAATGTGAAAGCCAAAATCCAGGATAAAGAGGGAATTCCTCCGGATCAG 186888 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||||||||| || | ||||| || ||| |||| ||||||||| Sbjct 186887 CAGCGTCTGATTTTCGCCGGCAAGCAGCTAGAAGATGGTAGAACCCTTTCAGATTACAAC 186828 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 ||||| |||||||| || | ||||| || ||||| | || || ||| Sbjct 186827 ATTCAGAAGGAGTCAACACTGCATTTAGTCTTGCGACTTCGTGGAGGC 186780 >seq324 Length=2934362 Score = 138 bits (152), Expect = 1e-27 Identities = 171/234 (73%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 26984 CGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACC 27043 || ||||||||| ||||| || ||| ||||||||||| | || || | || || || | Sbjct 1891734 CGGCATGCAGATCTTTGTGAAGACTTTGACCGGCAAGACCATCACATTGGAGGTCGAGGC 1891793 Query 27044 GTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGA 27103 ||||| | || |||| |||||| ||| || |||||||| || || || || || || Sbjct 1891794 CTCCGATACCATCGAGAATGTCAAAGCAAAGATCCAAGACAAGGAGGGGATCCCTCCAGA 1891853 Query 27104 TCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTA 27163 ||| ||| | || || | || || ||||| | ||||| | ||| | || || || Sbjct 1891854 TCAGCAGAGATTGATCTTTGCTGGGAAACAGCTCGAAGATGGCCGCACCCTGTCGGACTA 1891913 Query 27164 CAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||| |||||||||||||| | ||| ||||| | ||||| || |||||||| Sbjct 1891914 CAACATCCAAAAGGAGTCGACTCTGCATCTGGTTCTCCGTTTACGTGGTGGCAT 1891967 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || ||| |||| ||||| | || ||| | || || || | || Sbjct 1892422 ATGCAGATTTTTGTGAAGACTTTGACGGGCAAAACCATCACTTTGGAGGTTGAGGCTTCT 1892481 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || || || || ||||| || |||||||| |||||||| || Sbjct 1892482 GACACTATTGAAAATGTGAAGGCCAAGATCCAAGATAAGGAAGGCATTCCACCCGACCAG 1892541 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | | || | ||| || ||||| |||||||| | ||| | ||||| |||||| Sbjct 1892542 CAAAGACTGATCTTCGCGGGGAAACAGCTGGAAGACGGACGCACCCTGTCCGACTACAAC 1892601 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| || ||||| || || ||||| |||||||| | ||||| || || Sbjct 1892602 ATTCAGAAAGAGTCTACTTTGCATTTAGTTTTGCGACTCCGGGGCGGTAT 1892651 Score = 125 bits (138), Expect = 6e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || |||| || || |||||||| | || || ||| |||| Sbjct 1892650 ATGCAGATTTTTGTCAAGACCTTGACTGGTAAAACTATTACTTTGGAGGTCGAAGCGTCG 1892709 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || |||| || ||| ||||||||||||||||| ||||| |||||||| ||| Sbjct 1892710 GATACCATCGAGAACGTGAAAGCCAAAATTCAAGACAAAGAGGGCATCCCACCCGACCAA 1892769 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | | || | ||| || ||||| | || ||| | ||| | ||||| |||||| Sbjct 1892770 CAAAGACTGATCTTCGCGGGGAAACAGCTTGAGGACGGGCGTACCTTATCCGACTACAAC 1892829 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGT 27196 || || |||||||| ||| | || |||| Sbjct 1892830 ATCCAGAAGGAGTCCACCCTCCACCTGGT 1892858 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||| || ||| |||| || | || || || | ||| Sbjct 1892878 ATGCAGATCTTCGTCAAGACCTTGACGGGGAAGACTATCACGTTGGAGGTCGAGGCCTCC 1892937 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| || || || ||||| |||||||||||||| ||||| || || Sbjct 1892938 GACACCATCGAGAACGTGAAGGCGAAGATTCAGGACAAAGAAGGCATTCCACCTGACCAG 1892997 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | ||||| | ||| ||||||||| | || ||| | ||| | |||||||||||| Sbjct 1892998 CAAAGGTTAATCTTCGCGGGCAAACAACTCGAGGACGGGCGCACCTTGTCCGATTACAAC 1893057 Query 27168 ATTCAAAAGGAGTCGAC 27184 || || || || || || Sbjct 1893058 ATCCAGAAAGAATCCAC 1893074 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || ||| ||||||||||| | || || | || || || | ||| Sbjct 1892194 ATGCAGATTTTTGTGAAGACTTTGACCGGCAAGACCATCACATTGGAGGTCGAGGCCTCC 1892253 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| |||||| || || || ||||| || || || || || ||||| Sbjct 1892254 GACACCATCGAGAATGTCAAAGCGAAGATCCAGGACAAGGAGGGGATCCCCCCGGATCAG 1892313 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | || || ||||| | |||||| | ||| | || || |||||| Sbjct 1892314 CAGAGATTGATCTTTGCTGGGAAACAGCTCGAAGACGGCCGCACCCTGTCTGACTACAAC 1892373 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGT 27196 || || ||||| || || | ||| |||| Sbjct 1892374 ATCCAGAAGGAATCCACTCTGCATCTGGT 1892402 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| || || || || || |||| || ||| | || ||| | || ||||| | || Sbjct 1891965 CATGCAAATTTTCGTCAAGACCTTGACAGGAAAGACGATCACTTTGGAGGTGGAGGCTTC 1892024 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | || |||| || || || || || |||||||||||||| ||||| || || Sbjct 1892025 GGACACCATCGAGAACGTGAAGGCGAAGATCCAGGACAAAGAAGGCATTCCACCTGACCA 1892084 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 || | || || | ||| |||||||| | || ||| | || | ||||||||||| Sbjct 1892085 GCAAAGGTTGATCTTCGCAGGCAAACAGCTCGAGGACGGACGCACATTGTCCGATTACAA 1892144 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGT 27196 ||| || || || || ||| | || |||| Sbjct 1892145 CATCCAGAAAGAATCTACCCTTCACCTGGT 1892174 >seq777 Length=4062919 Score = 93.3 bits (102), Expect = 4e-14 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 27089 AGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTC 27148 ||| || ||||| ||||| ||| | || || | || || || |||||||||||| | Sbjct 197677 AGGAATTCCACCTGATCAGCAGAGATTGATCTTTGCTGGGAAGCAATTGGAAGACGGCCG 197618 Query 27149 GACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCG 27208 ||| | || |||||||| |||||||| ||||| || ||||| ||||| |||| ||||| Sbjct 197617 GACTCTCTCAGATTACAATATTCAAAAAGAGTCTACATTACACTTGGTACTGCGCTTGCG 197558 Query 27209 GGGTGG 27214 ||||| Sbjct 197557 AGGTGG 197552 >seq917 Length=726255 Score = 84.2 bits (92), Expect = 2e-11 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 49818 ATACGCACCCGGTAAAAGACATTGGTTGAAAATTAAAAAAGACTACTTGTGCGATGGCGC 49877 ||||| ||| || || |||||||| |||| | ||||| ||||| |||||| ||||| Sbjct 380365 ATACGAACCTGGAAAGCGACATTGGCTGAAGGTAAAAAAGGACTATCTGTGCGGGGGCGC 380424 Query 49878 CATGGCCGATAGCGTTGATTTGGTGGTTTTGGGTGCATGGTACGGTTCTGGAAAAAAGGG 49937 ||||||||||||| ||| | || || | || ||||||||||| | || || || || Sbjct 380425 GATGGCCGATAGCGCAGATCTCGTTGTGCTTGGAGCATGGTACGGCACAGGCAACAAAGG 380484 Query 49938 T 49938 | Sbjct 380485 T 380485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434841620592960