Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dinoponera_20quadriceps_20[refseq_20GCF_5F001313825.1_202015-10-13] 14,123 sequences; 259,665,865 total letters Query= NC_028821.1 Length=40670 Score E Sequences producing significant alignments: (Bits) Value seq12456 159 9e-35 >seq12456 Length=1155 Score = 159 bits (176), Expect = 9e-35 Identities = 141/176 (80%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 18006 GAAATGTCTGTACGGTCTGCAAATAATACACCACGTTTTACATCGCCAATAAATGCTAAT 18065 |||| ||||| |||||||||||| |||||||||||||||||||| || ||||| ||| Sbjct 1138 GAAACGTCTGAACGGTCTGCAAAGAATACACCACGTTTTACATCACCGATAAACGCTTTA 1079 Query 18066 GCGTCTCCGTTTTTACCTAACAAGTCATCACGCACAACTGTTACATTCATACCTAACACG 18125 || || || | ||||| || || ||||| ||||| ||||||||||||||||| || Sbjct 1078 GCTTCACCTTGGGCACCTAGTAAATCGTCACGTACAACAGTTACATTCATACCTAATACT 1019 Query 18126 GTGTTACCTGCAGTGTTGATGATACTGTCTTGTAGTAAATAGCGACCGTTACCATC 18181 ||||||| || ||||| |||||| ||||||| ||| || ||||| |||||||| Sbjct 1018 CTGTTACCAGCTGTGTTAATGATAGAATCTTGTAATAAGTAACGACCATTACCATC 963 Score = 132 bits (146), Expect = 1e-26 Identities = 164/222 (74%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 18410 CGCTTCTTGTGAGATTGGAATCGCTCCACGATAAGTGTCTACTTCCCAAGTGATTGTTTC 18469 |||||||| || | ||||| |||||||||||||| || |||||||| |||| || Sbjct 742 CGCTTCTTCAGATAAAGGAATAGCTCCACGATAAGTTTCAACTTCCCATCCGATTTCTTT 683 Query 18470 GAATTCCGGACGAGCTAACTCAGGGTTTTTCTCTAATTCAGCAACAGTGTTGAATTTAGC 18529 ||||| || ||||| |||||||||| | |||||| |||| |||||||||||||| Sbjct 682 AAATTCAGGTGCTGCTAATTCAGGGTTTTCTTTTAATTCTTCAACTGTGTTGAATTTAGC 623 Query 18530 GTTAGCACGTTTTAAGATTGGGTACTTACCAGATGCAGTTGAAACTGAAGTCTTT-TGTA 18588 | |||||| | ||||| | ||||| |||| || ||||| | ||||| | || Sbjct 622 AGTTGCACGTAAAACAATTGGATGTTTACCTGATGGGTTTTTAACTG-ATTCTTTATCTA 564 Query 18589 CTAACTCTGATAAGTCTTGGACTGTTTTCACTTCTTTTTCAG 18630 |||| ||||| ||||| |||||||| | ||| | ||||| Sbjct 563 CTAATGTAGATAAATCTTGAACTGTTTTAATTTCATGTTCAG 522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130000593862032