Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dinoponera_20quadriceps_20[refseq_20GCF_5F001313825.1_202015-10-13] 14,123 sequences; 259,665,865 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq3542 168 2e-36 seq324 168 2e-36 seq408 136 9e-27 >seq3542 Length=209091 Score = 168 bits (186), Expect = 2e-36 Identities = 170/221 (77%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| | || || || ||||| ||||| || || |||||||| || || | ||| || Sbjct 187471 CGAAGACGCAGAACCAGATGAAGCGTGGATTCCTTCTGGATGTTGTAGTCGGAAAGAGTT 187530 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 || |||||||||| ||| ||||| ||||| || || || || || || ||||||| ||| Sbjct 187531 CTGCCATCTTCCAACTGTTTGCCGGCGAAAATCAGACGCTGCTGATCCGGAGGAATTCCC 187590 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 || ||||| |||||||| ||| || ||||| || || ||||| ||| ||||||||| Sbjct 187591 TCTTTGTCTTGGATCTTGGCTTTTACATTTTCTATTGTATCAGAAGCTTCGACCTCGAGA 187650 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| || || |||||||| ||||| | ||||| Sbjct 187651 GTGATGGTCTTGCCTGTAAGAGTCTTCACAAAGATTTGCAT 187691 Score = 167 bits (184), Expect = 5e-36 Identities = 172/225 (76%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949 || |||||||| | ||| | || || || ||||| || || ||||| ||||| | ||| Sbjct 186783 TCCACGAAGTCGCAAGACTAAATGCAGTGTTGACTCCTTCTGAATGTTGTAATCTGAAAG 186842 Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009 ||| || |||||||| ||||||||||| ||||| || || || || || || ||||||| Sbjct 186843 GGTTCTACCATCTTCTAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGATCCGGAGGAAT 186902 Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069 ||| || || |||||||| || |||||| ||||| || ||||| || ||| || || Sbjct 186903 TCCCTCTTTATCCTGGATTTTGGCTTTCACATTTTCTATTGTGTCGGAAGCTTCGACTTC 186962 Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||| ||||| || || |||||||| ||||| ||||| | ||||| Sbjct 186963 GAGGGTGATGGTTTTACCCGTGAGGGTCTTCACAAATATTTGCAT 187007 Score = 165 bits (182), Expect = 2e-35 Identities = 169/221 (76%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| | || || | ||||| ||||| || || |||||||| || || | ||| || Sbjct 187015 CGAAGGCGCAGAACCAAATGAAGTGTGGATTCCTTCTGGATGTTGTAGTCGGAAAGAGTT 187074 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 || |||||||||| ||| ||||| ||||| || || || || || || ||||||| ||| Sbjct 187075 CTGCCATCTTCCAACTGTTTGCCAGCGAAAATCAGACGCTGCTGATCCGGAGGAATTCCC 187134 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 || ||||| |||||||| || || ||||| || |||||||| ||| || ||||| Sbjct 187135 TCTTTGTCTTGGATCTTGGCCTTTACATTTTCTATTGTGTCAGAAGCTTCGACTTCGAGG 187194 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| || ||||||||||||||||| | ||||| Sbjct 187195 GTGATGGTCTTGCCTGTGAGAGTCTTTACAAATATTTGCAT 187235 >seq324 Length=2934362 Score = 168 bits (186), Expect = 2e-36 Identities = 170/221 (77%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||||| || || |||||||| || || ||||| |||||||| ||||| | | || Sbjct 1892186 CGAAGTCGAAGTACCAGGTGAAGGGTAGATTCTTTCTGGATGTTGTAATCGGACAATGTG 1892127 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | ||| || || ||||| |||||||||||||| | | ||| |||||||| |||| ||| Sbjct 1892126 CGTCCGTCCTCGAGCTGTTTGCCTGCGAAGATCAACCTTTGCTGGTCAGGTGGAATGCCT 1892067 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 || |||||||||||||| |||||||| ||||||||||| || || ||||| | | Sbjct 1892066 TCTTTGTCCTGGATCTTCGCCTTCACGTTCTCGATGGTGTCCGAAGCCTCCACCTCCAAA 1892007 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||||||||||||| || | ||||| || || | ||||| Sbjct 1892006 GTGATCGTCTTTCCTGTCAAGGTCTTGACGAAAATTTGCAT 1891966 Score = 158 bits (174), Expect = 3e-33 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || ||||||||||| ||||| ||||| |||||||| ||||| | | ||| | || || Sbjct 1893089 AGTACAAGGTGAAGCGTGGATTCTTTCTGGATGTTGTAATCGGACAAGGTGCGCCCGTCC 1893030 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || || ||||| |||||||| | | ||| |||||||| |||| ||||| |||||| Sbjct 1893029 TCGAGTTGTTTGCCCGCGAAGATTAACCTTTGCTGGTCAGGTGGAATGCCTTCTTTGTCC 1892970 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| |||||||| ||||||||||| ||| || ||||| | ||||| ||| Sbjct 1892969 TGAATCTTCGCCTTCACGTTCTCGATGGTGTCGGAGGCCTCGACCTCCAACGTGATAGTC 1892910 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| | ||||| || || | |||||| Sbjct 1892909 TTCCCCGTCAAGGTCTTGACGAAGATCTGCAT 1892878 Score = 154 bits (170), Expect = 3e-32 Identities = 153/198 (77%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 210917 AGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCC 210976 ||| |||||||| || ||||| || || | ||||| | ||| ||||||||||| || || Sbjct 1892619 AGTAGACTCTTTCTGAATGTTGTAGTCGGACAGGGTGCGTCCGTCTTCCAGCTGTTTCCC 1892560 Query 210977 TGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTT 211036 |||||||| || | ||| ||||| || |||| |||||||| || |||||||| || Sbjct 1892559 CGCGAAGATCAGTCTTTGCTGGTCGGGTGGAATGCCTTCCTTATCTTGGATCTTGGCCTT 1892500 Query 211037 CACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGT 211096 ||| ||||| || |||||||| |||||||| | |||||| || || ||||| | ||| Sbjct 1892499 CACATTTTCAATAGTGTCAGAAGCCTCAACCTCCAAAGTGATGGTTTTGCCCGTCAAAGT 1892440 Query 211097 CTTTACAAACACCTGCAT 211114 ||| ||||| | |||||| Sbjct 1892439 CTTCACAAAAATCTGCAT 1892422 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || || || ||||| ||||| ||||||||||| || |||| ||||| | |||||| Sbjct 1891949 AGAACCAGATGCAGAGTCGACTCCTTTTGGATGTTGTAGTCCGACAGGGTGCGGCCATCT 1891890 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||| || || || ||||| | | || || || ||||| | || |||||||| Sbjct 1891889 TCGAGCTGTTTCCCAGCAAAGATCAATCTCTGCTGATCTGGAGGGATCCCCTCCTTGTCT 1891830 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||||||| ||| || || |||||||| || ||| || ||||| | ||||| ||| Sbjct 1891829 TGGATCTTTGCTTTGACATTCTCGATGGTATCGGAGGCCTCGACCTCCAATGTGATGGTC 1891770 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || | |||||| ||||| | |||||| Sbjct 1891769 TTGCCGGTCAAAGTCTTCACAAAGATCTGCAT 1891738 Score = 141 bits (156), Expect = 2e-28 Identities = 164/221 (74%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| | || || | |||||| || || || || |||||||||||||| | | || Sbjct 1891730 CGAAGCCGAAGTACCAAGTGAAGGGTAGATTCCTTCTGGATGTTATAATCGGACAATGTG 1891671 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | ||| || || || |||||||| || ||||| || || || ||||| || || | ||| Sbjct 1891670 CGTCCGTCCTCGAGTTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCGGGTGGGATCCCT 1891611 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 || || ||||| ||||| |||||||| ||||| ||||| || |||||| ||||| Sbjct 1891610 TCTTTATCCTGAATCTTGGCCTTCACGTTCTCGATAGTGTCGGACGCTTCAACTTCGAGG 1891551 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || ||||| || ||||| || || | |||||| Sbjct 1891550 GTGATGGTTTTCCCCGTCAGTGTCTTCACGAAAATCTGCAT 1891510 Score = 140 bits (154), Expect = 8e-28 Identities = 164/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||||| || || || || |||||||| || || |||||||| || || | ||||| Sbjct 1892415 ACGAAGTCGGAGTACCAGATGCAGAGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGT 1892356 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | || ||||| ||||| || || || ||||| | | || || || || || | || Sbjct 1892355 GCGGCCGTCTTCGAGCTGTTTCCCAGCAAAGATCAATCTCTGCTGATCCGGGGGGATCCC 1892296 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||||||||||| ||| || || ||||||||||| ||| || ||||| | Sbjct 1892295 CTCCTTGTCCTGGATCTTCGCTTTGACATTCTCGATGGTGTCGGAGGCCTCGACCTCCAA 1892236 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| || || | |||||| ||||| | |||||| Sbjct 1892235 TGTGATGGTCTTGCCGGTCAAAGTCTTCACAAAAATCTGCAT 1892194 >seq408 Length=1748099 Score = 136 bits (150), Expect = 9e-27 Identities = 143/188 (76%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 ||||| || ||||| || | | || | ||| || |||| ||||||||| || ||||| Sbjct 1304022 TTTTGAATATTATAGTCGGACAAAGTACGTCCGTCCTCCAACTGCTTGCCAGCAAAGATT 1304081 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 || || || || ||||| |||| ||||||||||||||||||||| || || |||||| Sbjct 1304082 AGTCGCTGCTGATCAGGCGGAATTCCTTCCTTGTCCTGGATCTTAGCCTTTACATTTTCG 1304141 Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAAC 211106 || ||||| || || ||||| || |||||||| || |||||||| || || || || Sbjct 1304142 ATTGTGTCGGATGCCTCCACCTCAAGGGTGATCGTTTTACCCGTGAGGGTTTTCACGAAA 1304201 Query 211107 ACCTGCAT 211114 | |||||| Sbjct 1304202 ATCTGCAT 1304209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158942250358895