Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dinoponera_20quadriceps_20[refseq_20GCF_5F001313825.1_202015-10-13] 14,123 sequences; 259,665,865 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq324 86.0 5e-12 >seq324 Length=2934362 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 39057 GCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGG- 39115 ||| ||||| | ||| | || | || |||||| ||||| || || || ||||||| Sbjct 1893105 GCCACCTCTAAGGCGAAGTACAAGGTGAAGCGTGGATTCTTTCTGGATGTTGTAATCGGA 1893046 Query 39116 CAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGG 39175 |||| || || |||| || || ||||||||||| || || | | |||||||| | | Sbjct 1893045 CAAG-GTGCGCCCGTCCTCGAGTTGTTTGCCCGCGAAGATTAACCTTTGCTGGTCAGGTG 1892987 Query 39176 GCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCA 39235 | | || ||||||||| || ||| || | || | | || ||| | ||| | Sbjct 1892986 GAATGCCTTCTTTGTCCTGAATCTTCGCCTTCACGTTCTCGATGGTGTCGGAGGCCTCGA 1892927 Query 39236 CGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | |||| ||||||| | || ||||||| || || || ||||| ||||| Sbjct 1892926 CCTCCAACGTGATAGTCTTCCCCGTCAAGGTCTTGACGAAGATCTGCAT 1892878 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 ||||| || || || || || || || |||||||||| | ||| ||| |||| || Sbjct 1891718 ACCAAGTGAAGGGTAGATTCCTTCTGGATGTTATAATCGGACAATGTGCGTCCGTCCTCG 1891659 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-GGTGGGCACGCTCTCTTTGTCCAT 39194 || || ||||| ||||| || |||||||||||||| |||||| | || ||||| ||| Sbjct 1891658 AGTTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCGGGTGGGATCCCT-TCTTTATCCTG 1891600 Query 39195 GATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 || || || | || | | || ||| || || || || | ||||| |||| Sbjct 1891599 AATCTTGGCCTTCACGTTCTCGATAGTGTCGGACGCTTCAACTTCGAGGGTGATGGTTTT 1891540 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 |||||||| || || || || || ||||| Sbjct 1891539 CCCCGTCAGTGTCTTCACGAAAATCTGCAT 1891510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429471664866299