Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dinoponera_20quadriceps_20[refseq_20GCF_5F001313825.1_202015-10-13] 14,123 sequences; 259,665,865 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq408 118 7e-22 seq3542 116 3e-21 seq324 116 3e-21 >seq408 Length=1748099 Score = 118 bits (130), Expect = 7e-22 Identities = 139/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| |||||||||||||| ||||||||||| || || || || | | Sbjct 1304209 ATGCAGATTTTCGTGAAAACCCTCACGGGTAAAACGATCACCCTTGAGGTGGAGGCATCC 1304150 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | |||| |||| || || ||||| ||||| | ||||| ||||| Sbjct 1304149 GACACAATCGAAAATGTAAAGGCTAAGATCCAGGACAAGGAAGGAATTCCGCCTGATCAG 1304090 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||| |||| ||||| ||||| || |||| |||| ||| ||||| ||| || || Sbjct 1304089 CAGCGACTAATCTTTGCTGGCAAGCAGTTGGAGGACGGACGTACTTTGTCCGACTATAAT 1304030 Query 23791 ATACAAAA 23798 || ||||| Sbjct 1304029 ATTCAAAA 1304022 >seq3542 Length=209091 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || ||||| ||||| || || || || ||||||||||| || | | Sbjct 187463 ATGCAGATATTTGTCAAAACTCTCACAGGCAAGACTATTACTCTCGAAGTCGAAGCTTCT 187404 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | |||| ||||| || || |||||||| || | || || ||||| Sbjct 187403 GACACGATAGAAAATGTAAAAGCCAAGATCCAAGACAAAGAGGGAATTCCTCCGGATCAG 187344 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | || || ||||||||||| ||||||| | | ||| | ||| |||||| Sbjct 187343 CAGCGTCTGATTTTCGCCGGCAAACAGTTGGAAGATGGCAGAACTCTTTCCGACTACAAC 187284 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || || || || |||||| | ||||| ||| | | | |||||||| Sbjct 187283 ATCCAGAAGGAATCCACACTTCATTTGGTTCTGCGTCTTCGAGGAGG 187237 Score = 107 bits (118), Expect = 1e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || || || ||||||||||| ||||| ||||| |||||||| || | | Sbjct 187007 ATGCAAATATTTGTGAAGACCCTCACGGGTAAAACCATCACCCTCGAAGTCGAAGCTTCC 186948 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | |||| | ||| ||||| || ||||| || | || || ||||| Sbjct 186947 GACACAATAGAAAATGTGAAAGCCAAAATCCAGGATAAAGAGGGAATTCCTCCGGATCAG 186888 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | || || |||||||| || || ||||| | | || | ||||||||| Sbjct 186887 CAGCGTCTGATTTTCGCCGGCAAGCAGCTAGAAGATGGTAGAACCCTTTCAGATTACAAC 186828 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTT 23822 || || || ||||| ||| | |||||||| || Sbjct 186827 ATTCAGAAGGAGTCAACACTGCATTTAGTCTT 186796 Score = 89.7 bits (98), Expect = 3e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || || || || || || || || || ||||||||||| || || | | Sbjct 187691 ATGCAAATCTTTGTGAAGACTCTTACAGGCAAGACCATCACTCTCGAGGTCGAAGCTTCT 187632 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || | |||| ||||| || || |||||||| || | || || ||||| Sbjct 187631 GATACAATAGAAAATGTAAAAGCCAAGATCCAAGACAAAGAGGGAATTCCTCCGGATCAG 187572 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | || || ||||||||||| ||||||| | | ||| | ||| |||||| Sbjct 187571 CAGCGTCTGATTTTCGCCGGCAAACAGTTGGAAGATGGCAGAACTCTTTCCGACTACAAC 187512 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || || || || ||||| | ||| | ||| | | | |||||||| Sbjct 187511 ATCCAGAAGGAATCCACGCTTCATCTGGTTCTGCGTCTTCGAGGAGG 187465 >seq324 Length=2934362 Score = 116 bits (128), Expect = 3e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || || || ||||| ||||| ||||| ||||||||||| | | Sbjct 1891510 ATGCAGATTTTCGTGAAGACACTGACGGGGAAAACCATCACCCTCGAAGTTGAAGCGTCC 1891569 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 |||||| | || | | || || ||| || |||||||| | || || || || Sbjct 1891570 GACACTATCGAGAACGTGAAGGCCAAGATTCAGGATAAAGAAGGGATCCCACCCGACCAG 1891629 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | || ||||| ||||| ||||| || |||| |||||| || |||||| ||| Sbjct 1891630 CAGCGTCTCATCTTTGCTGGCAAGCAACTCGAGGACGGACGCACATTGTCCGATTATAAC 1891689 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || || || || Sbjct 1891690 ATCCAGAAGGAATCTAC 1891706 Score = 107 bits (118), Expect = 1e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || || | ||||| ||||| |||||| | || ||||| | | Sbjct 1892422 ATGCAGATTTTTGTGAAGACTTTGACGGGCAAAACCATCACTTTGGAGGTTGAGGCTTCT 1892481 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 |||||| |||||| | || || || || || ||||| | || || || || Sbjct 1892482 GACACTATTGAAAATGTGAAGGCCAAGATCCAAGATAAGGAAGGCATTCCACCCGACCAG 1892541 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || | | || || || || ||||| |||||||||| |||||| | ||| |||||| Sbjct 1892542 CAAAGACTGATCTTCGCGGGGAAACAGCTGGAAGACGGACGCACCCTGTCCGACTACAAC 1892601 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTT 23822 || || |||||||| || || ||||||||||| Sbjct 1892602 ATTCAGAAAGAGTCTACTTTGCATTTAGTTTT 1892633 Score = 98.7 bits (108), Expect = 7e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || ||| | ||||| || || ||||| | || || || || | Sbjct 1892878 ATGCAGATCTTCGTCAAGACCTTGACGGGGAAGACTATCACGTTGGAGGTCGAGGCCTCC 1892937 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || || ||| ||||||||||| | || || || || Sbjct 1892938 GACACCATCGAGAACGTGAAGGCGAAGATTCAGGACAAAGAAGGCATTCCACCTGACCAG 1892997 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || | ||||| || || ||||||||||| || |||| ||||| || |||||||||| Sbjct 1892998 CAAAGGTTAATCTTCGCGGGCAAACAACTCGAGGACGGGCGCACCTTGTCCGATTACAAC 1893057 Query 23791 ATACAAAAAGAGTCCAC 23807 || || ||||| ||||| Sbjct 1893058 ATCCAGAAAGAATCCAC 1893074 Score = 95.1 bits (104), Expect = 8e-15 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| |||||||| || ||| | || ||||| ||||||||| | || || || | || Sbjct 1891966 ATGCAAATTTTCGTCAAGACCTTGACAGGAAAGACGATCACTTTGGAGGTGGAGGCTTCG 1892025 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || || || ||||||||||| | || || || || Sbjct 1892026 GACACCATCGAGAACGTGAAGGCGAAGATCCAGGACAAAGAAGGCATTCCACCTGACCAG 1892085 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || | || || || || |||||||| || || |||| |||||| || |||||||||| Sbjct 1892086 CAAAGGTTGATCTTCGCAGGCAAACAGCTCGAGGACGGACGCACATTGTCCGATTACAAC 1892145 Query 23791 ATACAAAAAGAGTCCAC 23807 || || ||||| || || Sbjct 1892146 ATCCAGAAAGAATCTAC 1892162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337951420414484