Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dinoponera_20quadriceps_20[refseq_20GCF_5F001313825.1_202015-10-13] 14,123 sequences; 259,665,865 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq3542 167 6e-36 seq324 165 2e-35 seq408 140 8e-28 >seq3542 Length=209091 Score = 167 bits (184), Expect = 6e-36 Identities = 166/215 (77%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || ||||| || ||||| || ||||| ||||||||||| || ||| || ||| Sbjct 187004 CAAATATTTGTGAAGACCCTCACGGGTAAAACCATCACCCTCGAAGTCGAAGCTTCCGAC 186945 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || ||| || || ||||| ||||| ||||| |||||||| ||||| Sbjct 186944 ACAATAGAAAATGTGAAAGCCAAAATCCAGGATAAAGAGGGAATTCCTCCGGATCAGCAG 186885 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || |||||||| || ||||| |||||||| || || ||| | ||||| ||| | Sbjct 186884 CGTCTGATTTTCGCCGGCAAGCAGCTAGAAGATGGTAGAACCCTTTCAGATTACAACATT 186825 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 || || || |||||||||||| | || ||| |||| Sbjct 186824 CAGAAGGAGTCAACACTGCATTTAGTCTTGCGACT 186790 Score = 163 bits (180), Expect = 7e-35 Identities = 162/210 (77%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || ||||||||||| || || ||||||||||| || ||| || ||| Sbjct 187232 CAAATATTTGTAAAGACTCTCACAGGCAAGACCATCACCCTCGAAGTCGAAGCTTCTGAC 187173 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || ||||| || |||||||| ||||| |||||||| ||||| Sbjct 187172 ACAATAGAAAATGTAAAGGCCAAGATCCAAGACAAAGAGGGAATTCCTCCGGATCAGCAG 187113 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || ||||| || |||||| | |||||||| || |||||| |||| || ||| || Sbjct 187112 CGTCTGATTTTCGCTGGCAAACAGTTGGAAGATGGCAGAACTCTTTCCGACTACAACATC 187053 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133 || || ||||| ||||| ||| | ||| || Sbjct 187052 CAGAAGGAATCCACACTTCATTTGGTTCTG 187023 Score = 163 bits (180), Expect = 7e-35 Identities = 162/210 (77%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || |||||||||||||| || || || || ||||| || ||| || ||| Sbjct 187460 CAGATATTTGTCAAAACTCTCACAGGCAAGACTATTACTCTCGAAGTCGAAGCTTCTGAC 187401 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || ||| ||||| || |||||||| ||||| |||||||| ||||| Sbjct 187400 ACGATAGAAAATGTAAAAGCCAAGATCCAAGACAAAGAGGGAATTCCTCCGGATCAGCAG 187341 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || |||||||| |||||| | |||||||| || |||||| |||| || ||| || Sbjct 187340 CGTCTGATTTTCGCCGGCAAACAGTTGGAAGATGGCAGAACTCTTTCCGACTACAACATC 187281 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133 || || ||||| ||||| ||| | ||| || Sbjct 187280 CAGAAGGAATCCACACTTCATTTGGTTCTG 187251 >seq324 Length=2934362 Score = 165 bits (182), Expect = 2e-35 Identities = 160/206 (78%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || || | |||||||| |||||||| | |||||||| || ||| Sbjct 1891969 CAAATTTTCGTCAAGACCTTGACAGGAAAGACGATCACTTTGGAGGTGGAGGCTTCGGAC 1892028 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||||||||| || ||||| |||||||||||||| || || || ||||||||| Sbjct 1892029 ACCATCGAGAACGTGAAGGCGAAGATCCAGGACAAAGAAGGCATTCCACCTGACCAGCAA 1892088 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | |||||||| || ||||||||||| || ||| | || | ||||||| ||| || Sbjct 1892089 AGGTTGATCTTCGCAGGCAAACAGCTCGAGGACGGACGCACATTGTCCGATTACAACATC 1892148 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || |||||||| || || || || || Sbjct 1892149 CAGAAAGAATCTACCCTTCACCTGGT 1892174 Score = 159 bits (176), Expect = 8e-34 Identities = 159/205 (78%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||||||||| || || || || ||||| ||||||||||| || ||| || ||| Sbjct 1891513 CAGATTTTCGTGAAGACACTGACGGGGAAAACCATCACCCTCGAAGTTGAAGCGTCCGAC 1891572 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||||||||| || ||||||||||| |||||||| ||||| || |||||||| Sbjct 1891573 ACTATCGAGAACGTGAAGGCCAAGATTCAGGATAAAGAAGGGATCCCACCCGACCAGCAG 1891632 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || || || || ||||| || ||| | || | ||||||||||| || Sbjct 1891633 CGTCTCATCTTTGCTGGCAAGCAACTCGAGGACGGACGCACATTGTCCGATTATAACATC 1891692 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || ||||| || || || |||| Sbjct 1891693 CAGAAGGAATCTACCCTTCA-CTTG 1891716 Score = 147 bits (162), Expect = 5e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| ||||| ||| | || || || || ||||| | ||||| || ||| ||| Sbjct 1892197 CAGATTTTTGTGAAGACTTTGACCGGCAAGACCATCACATTGGAGGTCGAGGCCTCCGAC 1892256 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||||||||| |||||| ||||| |||||||| || || ||||| ||||| ||||| Sbjct 1892257 ACCATCGAGAATGTCAAAGCGAAGATCCAGGACAAGGAGGGGATCCCCCCGGATCAGCAG 1892316 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || || |||||||||||||| || | || || | || || ||| || Sbjct 1892317 AGATTGATCTTTGCTGGGAAACAGCTCGAAGACGGCCGCACCCTGTCTGACTACAACATC 1892376 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || ||||| || |||||||| || Sbjct 1892377 CAGAAGGAATCCACTCTGCATCTGGT 1892402 Score = 145 bits (160), Expect = 2e-29 Identities = 158/207 (76%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || | || || || || ||||| | ||||| || ||| ||| Sbjct 1892881 CAGATCTTCGTCAAGACCTTGACGGGGAAGACTATCACGTTGGAGGTCGAGGCCTCCGAC 1892940 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||||||||| || |||||||||||||||||||| || || || ||||||||| Sbjct 1892941 ACCATCGAGAACGTGAAGGCGAAGATTCAGGACAAAGAAGGCATTCCACCTGACCAGCAA 1893000 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 | | |||||||| || ||||| ||||| || || | || |||| ||||||| ||| | Sbjct 1893001 AGGTTAATCTTCGCGGGCAAACAACTCGAGGACGGGCGCAC-CTTGTCCGATTACAACAT 1893059 Query 178103 CCAAAAAGAATCAACACTGCATCTTGT 178129 ||| |||||||| || || || ||||| Sbjct 1893060 CCAGAAAGAATCCACGCTTCACCTTGT 1893086 Score = 143 bits (158), Expect = 6e-29 Identities = 156/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || ||||| ||| | || || || || ||||| | ||||| || ||| || Sbjct 1891741 CAGATCTTTGTGAAGACTTTGACCGGCAAGACCATCACATTGGAGGTCGAGGCCTCCGAT 1891800 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||||||||| |||||| |||||| || ||||| || || |||||||| || ||||| Sbjct 1891801 ACCATCGAGAATGTCAAAGCAAAGATCCAAGACAAGGAGGGGATCCCTCCAGATCAGCAG 1891860 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || || ||||||||||||||||| | || || | || || ||| || Sbjct 1891861 AGATTGATCTTTGCTGGGAAACAGCTCGAAGATGGCCGCACCCTGTCGGACTACAACATC 1891920 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 ||||| || || || |||||||| ||| Sbjct 1891921 CAAAAGGAGTCGACTCTGCATCTGGTT 1891947 Score = 120 bits (132), Expect = 7e-22 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| || || || | || || ||||| || || | ||||| ||| || || Sbjct 1892653 CAGATTTTTGTCAAGACCTTGACTGGTAAAACTATTACTTTGGAGGTCGAAGCGTCGGAT 1892712 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||||||||| ||| || ||||| |||||||| || ||||| || ||||| ||| Sbjct 1892713 ACCATCGAGAACGTGAAAGCCAAAATTCAAGACAAAGAGGGCATCCCACCCGACCAACAA 1892772 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||| |||||||| || |||||||| || || || | || | |||| || ||| || Sbjct 1892773 AGACTGATCTTCGCGGGGAAACAGCTTGAGGACGGGCGTACCTTATCCGACTACAACATC 1892832 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 1892833 CAGAAGGAGTCCACCCTCCACCTGGT 1892858 >seq408 Length=1748099 Score = 140 bits (154), Expect = 8e-28 Identities = 142/185 (77%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||||||||| ||||| || |||||||||||||| |||||||| || ||| Sbjct 1304206 CAGATTTTCGTGAAAACCCTCACGGGTAAAACGATCACCCTTGAGGTGGAGGCATCCGAC 1304147 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || || ||||| |||||||| |||||||| || || || ||||| Sbjct 1304146 ACAATCGAAAATGTAAAGGCTAAGATCCAGGACAAGGAAGGAATTCCGCCTGATCAGCAG 1304087 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||| ||||| || || || ||| | || || ||| | ||| | |||| ||||| | Sbjct 1304086 CGACTAATCTTTGCTGGCAAGCAGTTGGAGGACGGACGTACTTTGTCCGACTATAATATT 1304027 Query 178104 CAAAA 178108 ||||| Sbjct 1304026 CAAAA 1304022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203513383710862