Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diuraphis_20noxia_20[refseq_20GCF_5F001186385.1_202015-07-23] 5,637 sequences; 395,073,589 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq166 127 1e-24 >seq166 Length=548810 Score = 127 bits (140), Expect = 1e-24 Identities = 236/344 (69%), Gaps = 2/344 (1%) Strand=Plus/Plus Query 101753 GTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCT 101812 |||||||| || |||||| | || | | ||||| || ||||| || || || || ||| Sbjct 535456 GTGACATGGGCTATCATGTATGTAAGTAATGAATAACTGGCAATATTGAAGGGTACCCCT 535515 Query 101813 AACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAA 101872 | ||||| ||||| |||| ||| |||| ||||||||| | | ||||| |||| || Sbjct 535516 AGACCCATGTCAGCCGATCGTTGGTACATTTGACAGGACAAATACCCATCGGCGACAAAA 535575 Query 101873 AATTG-ACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCA 101931 || || || | | |||||| || || || |||||||||| | || | |||||| Sbjct 535576 AACTGTACCAGACA-ATGACATGGTGGTAAGGCCATTTTAGGTACATCGCATGGATTCCA 535634 Query 101932 AGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAACTGTTT 101991 ||| ||| | ||| | || || |||||| ||||| || |||| || | | || Sbjct 535635 TGCAATCATAAGCATTCGCCTGTCATCAGGGTTAGTTTTGATTGTATTGATGACGTTTTG 535694 Query 101992 TAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTTTATATTCTGCTCCGAA 102051 | ||| |||| |||| ||| ||||| ||| || ||| || || ||| | Sbjct 535695 AAGTTGATCAATGCCTTTCCCTGAGTAATCTGTGTGTACATCTACATACTCAGCACCGTA 535754 Query 102052 ATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCAT 102095 ||| | ||| ||||||||||| || ||||| | || |||| || Sbjct 535755 ATGTCGCCATTGAAATCCATAAACGGGTCCCAAGTCACCTTAAT 535798 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361226381703887