Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diuraphis_20noxia_20[refseq_20GCF_5F001186385.1_202015-07-23] 5,637 sequences; 395,073,589 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq166 143 2e-29 >seq166 Length=548810 Score = 143 bits (158), Expect = 2e-29 Identities = 238/341 (70%), Gaps = 2/341 (1%) Strand=Plus/Plus Query 97117 GTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCT 97176 ||||||||||| ||||| | || | || ||||| || ||||| || || || |||||| Sbjct 535456 GTGACATGGGCTATCATGTATGTAAGTAATGAATAACTGGCAATATTGAAGGGTACCCCT 535515 Query 97177 AGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAA 97236 || ||||| ||||| |||| ||| || | |||||||| | | ||||| ||| || Sbjct 535516 AGACCCATGTCAGCCGATCGTTGGTACATTTGACAGGACAAATACCCATCGGCGACAAAA 535575 Query 97237 AACTGACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAA 97296 ||||| || |||||| || || || |||||||| || ||||| | |||||| Sbjct 535576 AACTGTACCAGACAATGACATGGTGGTAAGGCCATTTTAGGTACATCGCATGGATTCCAT 535635 Query 97297 GCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGCTTT 97356 ||| ||| | ||||| || || ||||| || | || ||||| || | | | Sbjct 535636 GCAATCATAAGCATTCGCCTGTCATCAGGGTTAGTTTTGATTGTATTGATGACGTTTTGA 535695 Query 97357 AATTGATCAACGCCTTCTCCACCATAAT-TGTGCTTAAGACCTTGATATTCTGCTCCAAA 97415 | |||||||| ||||| || |||| |||| | | | || ||| || || || | Sbjct 535696 AGTTGATCAATGCCTTTCCCTGAGTAATCTGTG-TGTACATCTACATACTCAGCACCGTA 535754 Query 97416 ATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTT 97456 ||| | |||||| ||||||||||| ||||| | ||| |||| Sbjct 535755 ATGTCGCCATTGAAATCCATAAACGGGTCCCAAGTCACCTT 535795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346760175614090