Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diuraphis_20noxia_20[refseq_20GCF_5F001186385.1_202015-07-23] 5,637 sequences; 395,073,589 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq166 183 2e-41 >seq166 Length=548810 Score = 183 bits (202), Expect = 2e-41 Identities = 250/348 (72%), Gaps = 1/348 (0%) Strand=Plus/Minus Query 20218 GGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGAC 20277 || || ||||| || || ||||||||||||||| |||||| || ||||| ||||| || Sbjct 535793 GGTGACTTGGGACCCGTTTATGGATTTCAATGGCGACATTACGGTGCTGAGTATGTAGAT 535734 Query 20278 ATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAATT 20337 | ||||| |||| | || |||| | |||||| | ||||| || || ||| ||| Sbjct 535733 GTACACACAGATTACTCAGGGAAAGGCATTGATCAACTTCAAAACGTCATCAATACAATC 535674 Query 20338 AAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCT 20397 ||||| ||||| | ||||| |||| || | || ||||| | ||||| ||| Sbjct 535673 AAAACTAACCCTGATGACAGGCGAATGCTTATGATTGCATGGAATCCATGCGATGTACCT 535614 Query 20398 TTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAATTG 20457 |||||| || || ||||||||| || || |||| || || || | ||| Sbjct 535613 AAAATGGCCTTACCACCATGTCATTGTCTGGTACAGTTTTTTGTCGCCGATGGGTATTTG 535554 Query 20458 TCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCA 20517 || ||||||||||| |||||||| ||||| ||||| || || || || ||||||||||| Sbjct 535553 TCCTGTCAAATGTACCAACGATCGGCTGACATGGGTCTAGGGGTACCCTTCAATATTGCC 535494 Query 20518 AGTTATGCGCTGCTTACGTATATGATTGCACATGTTA-CAGATTTAAA 20564 |||||| | | ||||| || ||||| || ||||| | | |||| ||| Sbjct 535493 AGTTATTCATTACTTACATACATGATAGCCCATGTCACCGGATTGAAA 535446 Score = 91.5 bits (100), Expect = 1e-13 Identities = 71/85 (84%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 20044 TTTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTTATTATGG 20103 ||||| | || || || ||| |||| |||||| || || |||||||| ||||||||| Sbjct 536154 TTTCCACTGTTGACAACAAAAAGGGTGTTTTGGCGTGGTGTCGTTGAAGAATTATTATGG 536095 Query 20104 TTTATTAAAGGATCAACAAATTCTA 20128 ||||||||||||||||||||||||| Sbjct 536094 TTTATTAAAGGATCAACAAATTCTA 536070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399156575684965