Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diuraphis_20noxia_20[refseq_20GCF_5F001186385.1_202015-07-23] 5,637 sequences; 395,073,589 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq308 91.5 1e-13 >seq308 Length=372676 Score = 91.5 bits (100), Expect = 1e-13 Identities = 133/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 139577 TTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATC 139636 ||||| ||||||||||| || ||| | |||||| ||||| || || || ||||| Sbjct 102739 TTTTGGATGTTATAATCCGACAATGTACGTCCGTCTTCAAGCTGCTTGCCGGCGAAGATC 102680 Query 139637 AGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCC 139696 | |||||| ||||| || || || |||||||| || |||||| ||| | | ||| Sbjct 102679 AAACGTTGTTGATCTGGCGGGATACCTTCTTTATCTTGGATTTTGGCTTTGACATTTTCA 102620 Query 139697 ACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAAT 139756 | ||||||| | ||| ||||| | || | ||||| || || | || || || || Sbjct 102619 ATAGTGTCGGAAGACTCAACCTCGAGAGTGATGGTCTTCCCTGTAAGGGTCTTCACAAAA 102560 Query 139757 ATTTGCAT 139764 |||||||| Sbjct 102559 ATTTGCAT 102552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496029046090400