Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diuraphis_20noxia_20[refseq_20GCF_5F001186385.1_202015-07-23] 5,637 sequences; 395,073,589 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq476 134 1e-26 >seq476 Length=239761 Score = 134 bits (148), Expect = 1e-26 Identities = 163/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 13684 TCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttttt 13743 ||||||||| ||| || || || ||| |||||||||||||| ||||||| ||| || Sbjct 226099 TCATCTCTAGAAATCAGCTCATTGCTAAAAGTTAATCCTGGCATTAATCCTCTTTTCTTC 226040 Query 13744 AACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCT 13803 |||||||||| |||||| || ||| || || ||||| || || || |||||||| || Sbjct 226039 AACCAAAATAATGCAGCAAAACTTCCAGAGAAAAATATACCTTCCACAGCAGCAAATGCA 225980 Query 13804 ATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCCATTTTCTAGCCCATTCAGAt 13863 | || | ||| ||||| | |||||| | | ||||||||| |||||| || | Sbjct 225979 ACTAACCTTTCACCAAAAGTTGCTTTGCTATCACTTATCCATTTAAGAGCCCAATCTGCC 225920 Query 13864 ttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAAA 13905 || ||||| | | | ||| ||||| || ||||| |||||| Sbjct 225919 TTCTTTTTTACACATGGCATGGTTTCAATGGCATTAAATAAA 225878 Score = 127 bits (140), Expect = 2e-24 Identities = 148/196 (76%), Gaps = 3/196 (2%) Strand=Plus/Minus Query 13901 ATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTT 13960 |||||||| | || ||| | | |||| | ||||||||||| | |||||||||||||| Sbjct 225802 ATAAATGTACTTTTCTTTTGGGTCCTGAA-TATATGTATCAATTAATAAGCTATACATTT 225744 Query 13961 CAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATT 14020 | || ||||| || || || ||| || || ||||||||||||||||| || | || Sbjct 225743 CTGAATGTATATTCTCCATCATTATTTGGAATCCATAAAAACATCTAGCCTCAGTTACTT 225684 Query 14021 GTACCTCC-GAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCA 14079 | || || ||| |||||| ||| | | |||||||||||||| ||||| ||| ||| Sbjct 225683 GAACTTCTTGAG-AAAATCGTTCAACAAGATTTTCATTAACAATGCCATCTGAAGCAGCA 225625 Query 14080 AAAAATGCCAATATGT 14095 |||||||| |||| || Sbjct 225624 AAAAATGCTAATACGT 225609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478555077436680