Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diuraphis_20noxia_20[refseq_20GCF_5F001186385.1_202015-07-23] 5,637 sequences; 395,073,589 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq876 113 2e-20 >seq876 Length=96896 Score = 113 bits (124), Expect = 2e-20 Identities = 171/239 (72%), Gaps = 6/239 (3%) Strand=Plus/Plus Query 3902 GGGTTCTCGGTTGAGGGTCAAGAAAATATGCAAGAAATGTTATCGAAAAAGATGTATTTG 3961 |||||||| ||||| |||||||||| | | |||||||| ||||| ||| ||||||| Sbjct 8981 GGGTTCTCTGTTGATGGTCAAGAAAGTTTTCAAGAAATTTTATCTAAACGATTGTATTTA 9040 Query 3962 TGTCAATGTTTAATTGCATTGATGATCATACGAATTGGTGGTCATTGTGTTATCAAATTT 4021 |||||| |||| ||| || | || | | | ||||| |||| | | ||| || Sbjct 9041 TGTCAAGCTTTAGCTGCTTTAAGTATTCTTCAACCAGGTGGACATTTTATGTGTAAACTT 9100 Query 4022 TTCGATATATTTACACCTTTTAGTGCTGGTTTAGTGTATTTGATGTA-TAGATCTTTTAA 4080 || |||||||| || ||||||||||||||| ||| | | || ||| |||||| Sbjct 9101 TTTGATATATTCACTGAATTTAGTGCTGGTTTATTGTTCCTTTTATACCAGA-GTTTTAA 9159 Query 4081 TCGTATTTGTATTTTCAAACCA--CATTCATCGCGACCGGCCAATTCTGAAAGATATTT 4137 | ||| |||||| ||||||| || | |||| || || ||||||||||| || || Sbjct 9160 ACAAATTAGTATTTACAAACCAGTCACTAGTCGC--CCTGCAAATTCTGAAAGGTAATT 9216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276534600508411