Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diuraphis_20noxia_20[refseq_20GCF_5F001186385.1_202015-07-23] 5,637 sequences; 395,073,589 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq118 116 2e-21 seq26 114 7e-21 seq24 113 2e-20 seq89 111 8e-20 seq86 111 8e-20 >seq118 Length=663266 Score = 116 bits (128), Expect = 2e-21 Identities = 78/87 (90%), Gaps = 2/87 (2%) Strand=Plus/Minus Query 11443 TAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 |||||||| | |||||||||| |||||||||| ||||||||||||||||||||||| Sbjct 240604 TAAAAAATTA--TTGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGA 240547 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||| |||||||||||||||||||| Sbjct 240546 CGCTCTAACCAACTGAGCTAATGGGCC 240520 >seq26 Length=1125148 Score = 114 bits (126), Expect = 7e-21 Identities = 77/86 (90%), Gaps = 2/86 (2%) Strand=Plus/Minus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 ||||||| | |||||||||| |||||||||| |||||||||||||||||||||||| Sbjct 278074 AAAAAAT--ATTTGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGAC 278017 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| |||||||||||||||||||| Sbjct 278016 GCTCTAACCAACTGAGCTAATGGGCC 277991 Score = 104 bits (114), Expect = 1e-17 Identities = 76/89 (85%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 11442 ATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACG 11501 |||||||| | ||||| |||| |||||||| | |||||||||| ||||||||||| Sbjct 280376 ATAAAAAAATAGTTTGGCTCATGGGGGGATCGAATCCACGACCTTCGCATTATTAGCACG 280435 Query 11502 ACGCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||||| ||||||||||||||||||||| Sbjct 280436 ACGCTCTAACCAACTGAGCTAATGGGCCG 280464 >seq24 Length=1139300 Score = 113 bits (124), Expect = 2e-20 Identities = 70/76 (92%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 11454 ATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCA 11513 ||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||| Sbjct 1014985 ATTGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCA 1014926 Query 11514 ACTGAGCTAATGGGCC 11529 |||||||||||||||| Sbjct 1014925 ACTGAGCTAATGGGCC 1014910 >seq89 Length=772902 Score = 111 bits (122), Expect = 8e-20 Identities = 77/87 (89%), Gaps = 2/87 (2%) Strand=Plus/Plus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 |||||||| ||||||||| |||||||||| |||||||||||||||||||||||| Sbjct 84788 AAAAAATCTC--TGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGAC 84845 Query 11504 GCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||| ||||||||||||||||||||| Sbjct 84846 GCTCTAACCAACTGAGCTAATGGGCCG 84872 >seq86 Length=750252 Score = 111 bits (122), Expect = 8e-20 Identities = 69/75 (92%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 |||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 435643 TTGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 435584 Query 11515 CTGAGCTAATGGGCC 11529 ||||||||||||||| Sbjct 435583 CTGAGCTAATGGGCC 435569 Lambda K H 0.639 0.410 0.921 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261473235309412