Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diuraphis_20noxia_20[refseq_20GCF_5F001186385.1_202015-07-23] 5,637 sequences; 395,073,589 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq166 131 4e-25 >seq166 Length=548810 Score = 131 bits (144), Expect = 4e-25 Identities = 236/340 (69%), Gaps = 10/340 (3%) Strand=Plus/Minus Query 111487 AAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAA 111546 ||||||| | ||||| ||||| |||||||||||||| || | ||||| || || | Sbjct 535795 AAGGTGACTTGGGACCCGTTTATGGATTTCAATGGCGACATTACGGTGCTGAGTATGTAG 535736 Query 111547 CCATGCACGACTCATATGATTCACAG---GGAACTGATCAATTACAGAATGTCATTGATC 111603 ||| || || || || | ||| | || | ||||||| | || || ||||| || Sbjct 535735 --ATGTAC-ACACAGATTACTCAGGGAAAGGCATTGATCAACTTCAAAACGTCATCAATA 535679 Query 111604 AAATTAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAAATGCAT 111663 ||| || | ||||| | | || || |||||| ||||||||| ||| ||| Sbjct 535678 CAATCAAAACTAACCCTGATGACAGGCGAATGCTTATGATTGCATGGAATCCA--TGCGA 535621 Query 111664 TGGAA--AAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGTACACGACGG 111721 || | |||||||| | |||||||||||| | || ||||||| ||| ||| || Sbjct 535620 TGTACCTAAAATGGCCTTACCACCATGTCATTGTCTGGTACAGTTTTTTGTCGCCGATGG 535561 Query 111722 GATGCTTTCATGCCAAATGTATCAGCGATCTGCTGATATTGGTCTTGGTGTTCCGTTTAA 111781 | | || || |||||||| || ||||| ||||| || ||||| || || || || || Sbjct 535560 GTATTTGTCCTGTCAAATGTACCAACGATCGGCTGACATGGGTCTAGGGGTACCCTTCAA 535501 Query 111782 TATTGCAAGTTACGCACTACTTACTTGCTTAATCGCTCAT 111821 |||||| ||||| || ||||||| | | | || || ||| Sbjct 535500 TATTGCCAGTTATTCATTACTTACATACATGATAGCCCAT 535461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303259466508134