Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diuraphis_20noxia_20[refseq_20GCF_5F001186385.1_202015-07-23] 5,637 sequences; 395,073,589 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq308 102 7e-17 seq489 96.9 3e-15 seq306 86.0 5e-12 >seq308 Length=372676 Score = 102 bits (112), Expect = 7e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || |||||||||||||| || || | || || || || ||||||| || || || | Sbjct 102549 AACATGCAAATTTTTGTGAAGACCCTTACAGGGAAGACCATCACTCTCGAGGTTGAGTCT 102608 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 |||| || | || || ||||| ||||| ||||| || || ||||| || || ||| Sbjct 102609 TCCGACACTATTGAAAATGTCAAAGCCAAAATCCAAGATAAAGAAGGTATCCCGCCAGAT 102668 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 ||||||||| | || || |||||||| ||| | || || || || | || ||||| Sbjct 102669 CAACAACGTTTGATCTTCGCCGGCAAGCAGCTTGAAGACGGACGTACATTGTCGGATTAT 102728 Query 22396 AACATTCAAAA 22406 ||||| ||||| Sbjct 102729 AACATCCAAAA 102739 >seq489 Length=245457 Score = 96.9 bits (106), Expect = 3e-15 Identities = 97/126 (77%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 22321 GGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGC 22380 ||||||||||| ||||| |||||| | |||||||| |||||||| | || ||| || Sbjct 239697 GGTATTCCACCTGATCAGCAACGTTTGATATTTGCTGGCAAACAACTTGAAGATGGGCGT 239756 Query 22381 ACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGC 22440 || | || ||||||||||||||||||||||| ||| | || || ||| | || || | Sbjct 239757 ACTCTGTCAGATTACAACATTCAAAAAGAATCTACCCTCCACTTGGTTCTTAGACTGAGA 239816 Query 22441 GGAGGT 22446 || ||| Sbjct 239817 GGTGGT 239822 >seq306 Length=365715 Score = 86.0 bits (94), Expect = 5e-12 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 22321 GGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGC 22380 || ||||| || ||||||||||||||||| ||||| ||||| || || || ||| ||| Sbjct 85448 GGCATTCCCCCGGATCAACAACGTCTTATTTTTGCTGGCAAGCAATTGGAAGATGGTCGC 85389 Query 22381 ACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGT 22427 || |||| || ||||| || |||||||| || || | || ||||| Sbjct 85388 ACACTCTCTGACTACAATATACAAAAAGAGTCTACACTTCACTTAGT 85342 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419699164292905