Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diuraphis_20noxia_20[refseq_20GCF_5F001186385.1_202015-07-23] 5,637 sequences; 395,073,589 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq208 87.8 1e-12 seq932 86.0 5e-12 >seq208 Length=490746 Score = 87.8 bits (96), Expect = 1e-12 Identities = 195/286 (68%), Gaps = 5/286 (2%) Strand=Plus/Minus Query 37837 TCTTGTGGAACGCGGCTCAAATTCAGCTTGTGCGCGAGGGTAAGATGCATCAGTATATGC 37896 |||| ||||| | || ||||| ||| | || || || ||||||||| | | | Sbjct 174791 TCTT-TGGAATTCTGCACAAATACAGTTGGTAAAGGAAGGCAAGATGCATGGTTTCCTAC 174733 Query 37897 GCATGTATTGGTGCAAGAAA-ATTTTGGAATGGTCTGATGATGCTCAGACCGCGCTCAAC 37955 ||||||| ||| |||| ||| || | |||||| ||||| | | | | || || | | Sbjct 174732 GCATGTACTGG-GCAAAAAAGATACTAGAATGGACTGATACTCCAGATAGAGCACT-AGC 174675 Query 37956 T-ACGCCATTTATCTCAATGATAAGTACAGCTTGGACGGGCGTGATCCCAACGGTTACGT 38014 | | || |||||||||||||| || || ||| |||| || ||||| || | |||| || Sbjct 174674 TGATGCAATTTATCTCAATGACAAATATAGCATGGATGGTCGTGACCCTAGTGGTTTTGT 174615 Query 38015 CGGCTGTTTGTGGTCTATATGCGGGCTACACGATAGAGCCTGGCGCGAGATTCCCATTTA 38074 || ||| ||||||| ||||| || | || ||| | ||| | || | |||| Sbjct 174614 TGGGTGTATGTGGTCAATATGTGGCATTCATGATCAGGGATGGAGAGAAAGAGAAATTTT 174555 Query 38075 CGGCAAGATTCGGTACATGAACTACAACGGATGTGTTAGGAAGTTT 38120 || || ||| |||| |||||||| | ||||| || |||||| Sbjct 174554 TGGAAAAATTAGGTATATGAACTATGAAGGATGCAAGAGAAAGTTT 174509 >seq932 Length=98639 Score = 86.0 bits (94), Expect = 5e-12 Identities = 78/96 (81%), Gaps = 8/96 (8%) Strand=Plus/Plus Query 114336 TGTATTGCTCTAGAATTACCAC-GTTATCCAAGTAAC-TGAGTAAGATCTAAGGAACCAA 114393 ||| | |||||||||||||||| |||||||||||||| || ||||||||||||| Sbjct 53722 TGTGTAGCTCTAGAATTACCACAGTTATCCAAGTAACTTGGGTAAGATCTAAGG------ 53775 Query 114394 AACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 114429 ||||||| || |||||| |||| ||| || ||||| Sbjct 53776 AACTGATTTAATGAGCCTTTCGCGGTTTCACCTTAA 53811 Score = 86.0 bits (94), Expect = 5e-12 Identities = 78/96 (81%), Gaps = 8/96 (8%) Strand=Plus/Plus Query 115533 TGTATTGCTCTAGAATTACCAC-GTTATCCAAGTAAC-TGAGTAAGATCTAAGGAACCAA 115590 ||| | |||||||||||||||| |||||||||||||| || ||||||||||||| Sbjct 53722 TGTGTAGCTCTAGAATTACCACAGTTATCCAAGTAACTTGGGTAAGATCTAAGG------ 53775 Query 115591 AACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 115626 ||||||| || |||||| |||| ||| || ||||| Sbjct 53776 AACTGATTTAATGAGCCTTTCGCGGTTTCACCTTAA 53811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397035121440874