Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diuraphis_20noxia_20[refseq_20GCF_5F001186385.1_202015-07-23] 5,637 sequences; 395,073,589 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq308 138 3e-27 seq489 111 4e-19 >seq308 Length=372676 Score = 138 bits (152), Expect = 3e-27 Identities = 146/191 (76%), Gaps = 6/191 (3%) Strand=Plus/Minus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 |||||||| ||||| || | | || ||||||||||| | || || || ||||||||| Sbjct 102739 TTTTGGATGTTATAATCCGACAATGTACGTCCGTCTTCAAGCTGCTTGCCGGCGAAGATC 102680 Query 288346 AGACGCTGTTGAGAATCTGG---GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 | ||| |||||| ||||| ||| ||||||||||| |||||||| ||||| || ||| Sbjct 102679 AAACGTTGTTGA---TCTGGCGGGATACCTTCTTTATCTTGGATTTTGGCTTTGACATTT 102623 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || |||| ||| || || || ||||| ||||| |||||||| || || ||||| || Sbjct 102622 TCAATAGTGTCGGAAGACTCAACCTCGAGAGTGATGGTCTTCCCTGTAAGGGTCTTCACA 102563 Query 288463 AATATCTGCAT 288473 || || ||||| Sbjct 102562 AAAATTTGCAT 102552 >seq489 Length=245457 Score = 111 bits (122), Expect = 4e-19 Identities = 91/111 (82%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429 ||||||||||| || ||||| | |||||| ||||| || ||||| ||| ||||||||| Sbjct 237622 CCTTCTTTATCTTGAATTTTAGATTTCACATTTTCAATTGAATCCGACGACTCTACTTCG 237563 Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATGTTA 288480 || |||||||| ||||| |||| ||||| ||||| ||||||||| || || Sbjct 237562 AGAGTGATCGTTTTCCCAGTCAACGTCTTCACGAAGATCTGCATTTTGCTA 237512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179569200566886