Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diuraphis_20noxia_20[refseq_20GCF_5F001186385.1_202015-07-23] 5,637 sequences; 395,073,589 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq308 87.8 2e-12 seq489 86.0 6e-12 >seq308 Length=372676 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 64256 TTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATG 64315 ||||| ||||| ||||| | | || || |||||||||||||||||||||| | || Sbjct 102739 TTTTGGATGTTATAATCCGACAATGTACGTCCGTCTTCAAGCTGCTTGCCGGCGAAGATC 102680 Query 64316 AGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTC 64374 | || || || || || || || |||||||| ||||| | |||| ||||| ||| || Sbjct 102679 AAACGTTGTTGATCTGGCGGGATACCTTCTTTATCTTGGA-TTTTGGCTTTGACATTTTC 102621 Query 64375 CACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAA 64434 | || || | || || || | ||| | |||||| || || | || || || || Sbjct 102620 AATAGTGTCGGAAGACTCAACCTCGAGAGTGATGGTCTTCCCTGTAAGGGTCTTCACAAA 102561 Query 64435 AATTTGCATTTTAAT 64449 ||||||||| || || Sbjct 102560 AATTTGCATGTTGAT 102546 >seq489 Length=245457 Score = 86.0 bits (94), Expect = 6e-12 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | || |||||| || | || | || ||||||||||||||||||||||||| Sbjct 239822 ACCACCTCTCAGTCTAAGAACCAAGTGGAGGGTAGATTCTTTTTGAATGTTGTAATCTGA 239763 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || ||| | |||||||| || ||||| ||| | || | || ||||| || || || Sbjct 239762 CAGAGTACGCCCATCTTCAAGTTGTTTGCCAGCAAATATCAAACGTTGCTGATCAGGTGG 239703 Query 64336 AATTCCT 64342 ||| ||| Sbjct 239702 AATACCT 239696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499609593778280