Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diuraphis_20noxia_20[refseq_20GCF_5F001186385.1_202015-07-23] 5,637 sequences; 395,073,589 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq535 107 1e-18 >seq535 Length=209741 Score = 107 bits (118), Expect = 1e-18 Identities = 107/139 (77%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 108449 AGAACACCATCCCGCAGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGA 108508 ||||| ||| ||| | ||||| | ||||||| | || || ||||||| | || ||| Sbjct 78002 AGAACGACATACCGGATTGGGTTCGCGATCACCGAGTGCATCACAAGTTCAGCGAGACGG 77943 Query 108509 CGGCCGACCCACACAACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGA 108568 |||||||| ||||||||||||||||| |||| |||||||||||||| ||||| ||| Sbjct 77942 ACGCCGACCCGCACAACGCCAACAGGGGTTTCTTCTTCTCGCACGTGGGTTGGCTGATGC 77883 Query 108569 TGACCAAGGACCCCGACGT 108587 | ||| |||| ||||| Sbjct 77882 AGCGCAAACACCCAGACGT 77864 Score = 91.5 bits (100), Expect = 1e-13 Identities = 70/83 (84%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 108871 GTGGCGGCGTTGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGAC 108930 |||||| |||||| |||||||||||||||||||||||||||||| || || | ||| Sbjct 69750 GTGGCGCTGTTGGCGTTCGGCGAGGGATGGCACAACTACCACCACGCTTTTCCGTGGGAC 69809 Query 108931 TACAAGGCCGCCGAGTTGGGGAA 108953 |||||||| |||||| |||| || Sbjct 69810 TACAAGGCGGCCGAGCTGGGCAA 69832 Score = 86.0 bits (94), Expect = 5e-12 Identities = 138/195 (71%), Gaps = 4/195 (2%) Strand=Plus/Plus Query 108466 TGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCACACAAC 108525 ||||| | || ||| | || |||||||||| | | |||||| |||||||| |||||| Sbjct 59564 TGGGTCCGGGACCACCGTGTCCACCACAAGTTCACCGACACGGACGCCGACCCGCACAAC 59623 Query 108526 GCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGACCCCGAC 108585 | |||| || | ||||||||| |||| ||||| ||| | |||| |||| || Sbjct 59624 TCGTCTCGGGGATTTTTCTTCTCGCACATGGGCTGGCTGATGGTCCGCAAGCACCCGGAT 59683 Query 108586 GTGATCTCGGCC--GGTCGAAAAATGGACATGACGGACATATACTCCGATCCGGTGGTAG 108643 || ||| |||| ||| | | ||||||| ||| || | ||||||||||||| Sbjct 59684 GT-ATC-CGGCAAGGGTGGCGCGGTCGACATGAAAGACCTAGAAGCCGATCCGGTGGTCA 59741 Query 108644 TGTGGCACACCAAGT 108658 ||||||| | |||| Sbjct 59742 TGTGGCAGAAAAAGT 59756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381746571850728