Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diuraphis_20noxia_20[refseq_20GCF_5F001186385.1_202015-07-23] 5,637 sequences; 395,073,589 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq489 96.9 2e-15 seq308 91.5 1e-13 >seq489 Length=245457 Score = 96.9 bits (106), Expect = 2e-15 Identities = 97/126 (77%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| || ||| | ||| || || |||||||| |||||||| ||||||||||| Sbjct 239821 CCACCTCTCAGTCTAAGAACCAAGTGGAGGGTAGATTCTTTTTGAATGTTGTAATCTGAC 239762 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| | | | | ||||| | |||||||||||| |||||||||| || || || |||| Sbjct 239761 AGAGTACGCCCATCTTCAAGTTGTTTGCCAGCAAATATCAAACGTTGCTGATCAGGTGGA 239702 Query 15070 ATTCCT 15075 || ||| Sbjct 239701 ATACCT 239696 >seq308 Length=372676 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/193 (71%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 14989 TTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATA 15046 ||||| ||||| ||||| || ||| || ||||||| | || ||||| ||| | | Sbjct 102739 TTTTGGATGTTATAATCC--GACAATGTACGTCCGTCTTCAAGCTGCTTGCCGGCGAAGA 102682 Query 15047 TCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTT 15106 ||||||| ||||| || || || ||||| || || |||||| ||| ||| ||| Sbjct 102681 TCAAACGTTGTTGATCTGGCGGGATACCTTCTTTATCTTGGATTTTGGCTTTGACATTTT 102622 Query 15107 CTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAA 15166 | ||||| ||| | || || || | || ||||| || ||||| || || || |||| Sbjct 102621 CAATAGTGTCGGAAGACTCAACCTCGAGAGTGATGGTCTTCCCTGTAAGGGTCTTCACAA 102562 Query 15167 AAATTTGCATATT 15179 |||||||||| || Sbjct 102561 AAATTTGCATGTT 102549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357367446834545